RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MYH2Q9UKX2 1941 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 CHGBP05060 677 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
CCL28-204ENST00000514421 HLA-DOAP06340 250 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 ZBTB48P10074 688 aaPredicted RBP9.98□□□□□ -0.81
CCL28-204ENST00000514421 TM4SF4P48230 202 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 VGLL4Q14135 290 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 METTL16Q86W50 562 aaKnown RBP9.98□□□□□ -0.81
CCL28-204ENST00000514421 LCORLQ8N3X6 602 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 APPBP2Q92624 585 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 WNK4Q96J92 1243 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 STRBPQ96SI9 672 aaKnown RBP9.98□□□□□ -0.81
CCL28-204ENST00000514421 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCL28-204ENST00000514421 ATP8A2Q9NTI2 1148 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 PALD1Q9ULE6 856 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 ATRNL1Q5VV63 1379 aa9.98□□□□□ -0.81
CCL28-204ENST00000514421 MYH13Q9UKX3 1938 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 SSC5DA1L4H1 1573 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 PRKAB2O43741 272 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 EIF5BO60841 1220 aaKnown RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 INPP5BP32019 993 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 PPATQ06203 517 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 NOL9Q5SY16 702 aaKnown RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 ERO1BQ86YB8 467 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 OSBP2Q969R2 916 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 OPTNQ96CV9 577 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 MCM9Q9NXL9 1143 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 SAP30BPQ9UHR5 308 aaKnown RBP9.97□□□□□ -0.81
CCL28-204ENST00000514421 SLC4A4Q9Y6R1 1079 aa9.97□□□□□ -0.81
CCL28-204ENST00000514421 PAPPA2Q9BXP8 1791 aa9.96□□□□□ -0.81
CCL28-204ENST00000514421 MANSC4A6NHS7 340 aaPredicted RBP9.96□□□□□ -0.82
CCL28-204ENST00000514421 SPDYE5A6NIY4 337 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.82
CCL28-204ENST00000514421 HSPA1AP0DMV8 641 aaKnown RBP9.96□□□□□ -0.82
CCL28-204ENST00000514421 HSPA1BP0DMV9 641 aaKnown RBP9.96□□□□□ -0.82
CCL28-204ENST00000514421 SLURP2P0DP57 97 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 GNAT2P19087 354 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 SREBF2Q12772 1141 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 TTC22Q5TAA0 569 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 GIMAP6Q6P9H5 292 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 SCYL3Q8IZE3 742 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 CRACR2BQ8N4Y2 399 aaPredicted RBP9.96□□□□□ -0.82
CCL28-204ENST00000514421 SDR42E1Q8WUS8 393 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 HELLSQ9NRZ9 838 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 SERPINB13Q9UIV8 391 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 TAOK2Q9UL54 1235 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 SNCAIPQ9Y6H5 919 aa9.96□□□□□ -0.82
CCL28-204ENST00000514421 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
CCL28-204ENST00000514421 FAM196BA6NMK8 535 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 USP17L12C9JPN9 530 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 USP17L21D6R901 530 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 CXCL11O14625 94 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 GPAA1O43292 621 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 CA12O43570 354 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 GSPT1P15170 499 aaKnown RBP9.95□□□□□ -0.82
CCL28-204ENST00000514421 GJA5P36382 358 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 CAP2P40123 477 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
CCL28-204ENST00000514421 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCL28-204ENST00000514421 PLCD1P51178 756 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 GTF2A2P52657 109 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 PPIL2Q13356 520 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 OTUD7BQ6GQQ9 843 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 AMOTL1Q8IY63 956 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 MS4A4AQ96JQ5 239 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 EHD4Q9H223 541 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 PICK1Q9NRD5 415 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 GINM1Q9NU53 330 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 ZHX2Q9Y6X8 837 aa9.95□□□□□ -0.82
CCL28-204ENST00000514421 COL2A1P02458 1487 aaPredicted RBP9.95□□□□□ -0.82
CCL28-204ENST00000514421 GSG1L2A8MUP6 293 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 M0R2C6 588 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 HIP1O00291 1037 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 IRF6O14896 467 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
CCL28-204ENST00000514421 APPP05067 770 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 PTPRAP18433 802 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 SDSP20132 328 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 CTCFP49711 727 aaPredicted RBP9.94□□□□□ -0.82
CCL28-204ENST00000514421 RRP1BQ14684 758 aaKnown RBP9.94□□□□□ -0.82
CCL28-204ENST00000514421 SLC4A8Q2Y0W8 1093 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 C12orf60Q5U649 245 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 TATDN1Q6P1N9 297 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 CTR9Q6PD62 1173 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 SEC62Q99442 399 aaKnown RBP9.94□□□□□ -0.82
CCL28-204ENST00000514421 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 UPF2Q9HAU5 1272 aaKnown RBP9.94□□□□□ -0.82
CCL28-204ENST00000514421 RNF186Q9NXI6 227 aa9.94□□□□□ -0.82
CCL28-204ENST00000514421 ECM29Q5VYK3 1845 aa9.93□□□□□ -0.82
CCL28-204ENST00000514421 FOXN1O15353 648 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms