RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 MAST3O60307 1309 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 PLXNA1Q9UIW2 1896 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 TLL1O43897 1013 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 PLIN1O60240 522 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 ITGB8P26012 769 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 GYG1P46976 350 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 CSPP1Q1MSJ5 1256 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 GJC2Q5T442 439 aaPredicted RBP15.12■□□□□ 0.01
SFXN1-210ENST00000513725 CCAR1Q8IX12 1150 aaKnown RBP15.12■□□□□ 0.01
SFXN1-210ENST00000513725 USP6NLQ92738 828 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 APBA2Q99767 749 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
SFXN1-210ENST00000513725 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
SFXN1-210ENST00000513725 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
SFXN1-210ENST00000513725 H7C1W4 665 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 CLTBP09497 229 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 MAPK4P31152 587 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
SFXN1-210ENST00000513725 C1orf53Q5VUE5 145 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 COG5Q9UP83 839 aa15.11■□□□□ 0.01
SFXN1-210ENST00000513725 LRRC37A2A6NM11 1700 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
SFXN1-210ENST00000513725 TLE2Q04725 743 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 IFIT5Q13325 482 aaKnown RBP15.1■□□□□ 0.01
SFXN1-210ENST00000513725 RAB30Q15771 203 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 FAM84BQ96KN1 310 aaPredicted RBP15.1■□□□□ 0.01
SFXN1-210ENST00000513725 DAGLAQ9Y4D2 1042 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 UTYO14607 1347 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 ZDBF2Q9HCK1 2354 aa15.1■□□□□ 0.01
SFXN1-210ENST00000513725 GRXCR1A8MXD5 290 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 KIAA0355O15063 1070 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 FRAT2O75474 233 aaPredicted RBP15.09■□□□□ 0.01
SFXN1-210ENST00000513725 CWF19L2Q2TBE0 894 aaKnown RBP15.09■□□□□ 0.01
SFXN1-210ENST00000513725 MORN1Q5T089 497 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 CCDC174Q6PII3 467 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
SFXN1-210ENST00000513725 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0.01
SFXN1-210ENST00000513725 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
SFXN1-210ENST00000513725 UBE4AQ14139 1066 aa15.08■□□□□ 0
SFXN1-210ENST00000513725 SLC28A3Q9HAS3 691 aa15.08■□□□□ 0
SFXN1-210ENST00000513725 CWC22Q9HCG8 908 aaKnown RBP15.08■□□□□ 0
SFXN1-210ENST00000513725 USP34Q70CQ2 3546 aa15.08■□□□□ 0
SFXN1-210ENST00000513725 CFAP54Q96N23 3096 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 IRX3P78415 501 aaPredicted RBP15.07■□□□□ 0
SFXN1-210ENST00000513725 NFIAQ12857 509 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 KSR2Q6VAB6 950 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 GPR142Q7Z601 462 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 PLEKHH3Q7Z736 793 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
SFXN1-210ENST00000513725 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.07■□□□□ 03e-7■□□□□ 8
SFXN1-210ENST00000513725 DOCK1Q14185 1865 aa15.07■□□□□ 0
SFXN1-210ENST00000513725 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
SFXN1-210ENST00000513725 ALADP13716 330 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 ADCYAP1R1P41586 468 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
SFXN1-210ENST00000513725 MAP2K5Q13163 448 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 LDHAL6AQ6ZMR3 332 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 CNNM1Q9NRU3 951 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 TMEM39AQ9NV64 488 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 FAM198AQ9UFP1 575 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 IQSEC3Q9UPP2 1182 aaPredicted RBP15.06■□□□□ 0
SFXN1-210ENST00000513725 ATRNL1Q5VV63 1379 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 LOC285556D6RIA3 1793 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 CHD7Q9P2D1 2997 aa15.06■□□□□ 0
SFXN1-210ENST00000513725 HMGCS2P54868 508 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 SPP2Q13103 211 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 GCKRQ14397 625 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 CCDC84Q86UT8 332 aaPredicted RBP15.05■□□□□ -0
SFXN1-210ENST00000513725 FERMT2Q96AC1 680 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 NKX2-4Q9H2Z4 354 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 CHMP3Q9Y3E7 222 aa15.05■□□□□ -0
SFXN1-210ENST00000513725 DOCK2Q92608 1830 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
SFXN1-210ENST00000513725 ATP2B2Q01814 1243 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 ZNF280CQ8ND82 737 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 TBC1D2Q9BYX2 928 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 FLRT1Q9NZU1 646 aa15.04■□□□□ -0
SFXN1-210ENST00000513725 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.04■□□□□ -0
SFXN1-210ENST00000513725 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
SFXN1-210ENST00000513725 MAP3K10Q02779 954 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 PPIGQ13427 754 aaKnown RBP eCLIP15.03■□□□□ -0
SFXN1-210ENST00000513725 RASIP1Q5U651 963 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 ZSCAN29Q8IWY8 852 aaPredicted RBP15.03■□□□□ -0
SFXN1-210ENST00000513725 ZFPM1Q8IX07 1006 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 SLC44A5Q8NCS7 719 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 HLA-CQ95604 372 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 PORCNQ9H237 461 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 TXNRD2Q9NNW7 524 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 CD320Q9NPF0 282 aa15.03■□□□□ -0
SFXN1-210ENST00000513725 PEX10O60683 326 aa15.02■□□□□ -0
SFXN1-210ENST00000513725 PQBP1O60828 265 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms