RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 MCM5P33992 734 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 PLCD1P51178 756 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 EVCP57679 992 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 NFIAQ12857 509 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 MFSD6Q6ZSS7 791 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 Q6ZUG5 572 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 CHST3Q7LGC8 479 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
DHFR-206ENST00000513048 LRRC2Q9BYS8 371 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 RNF41Q9H4P4 317 aaPredicted RBP11.06□□□□□ -0.64
DHFR-206ENST00000513048 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
DHFR-206ENST00000513048 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
DHFR-206ENST00000513048 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
DHFR-206ENST00000513048 GMPSP49915 693 aaPredicted RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 MMP14P50281 582 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 ANKRD1Q15327 319 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 ME3Q16798 604 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 RALYLQ86SE5 291 aaKnown RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 ZFPM1Q8IX07 1006 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 DPF2Q92785 391 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 KRT23Q9C075 422 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 TDRD3Q9H7E2 651 aaKnown RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 ZSWIM5Q9P217 1185 aa11.05□□□□□ -0.64
DHFR-206ENST00000513048 COL2A1P02458 1487 aaPredicted RBP11.05□□□□□ -0.64
DHFR-206ENST00000513048 SH2B2O14492 632 aaPredicted RBP11.04□□□□□ -0.64
DHFR-206ENST00000513048 KDM4AO75164 1064 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 RBM5P52756 815 aaKnown RBP eCLIP11.04□□□□□ -0.642e-7■□□□□ 11
DHFR-206ENST00000513048 CACNB3P54284 484 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 GABPAQ06546 454 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 TRDNQ13061 729 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 BRF1Q92994 677 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 DYNLL2Q96FJ2 89 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 HDAC9Q9UKV0 1011 aa11.04□□□□□ -0.64
DHFR-206ENST00000513048 ENTPD3O75355 529 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 PRDM1O75626 825 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
DHFR-206ENST00000513048 PICALMQ13492 652 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 DLGAP5Q15398 846 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SEC23AQ15436 765 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 C16orf86Q6ZW13 317 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SLC44A5Q8NCS7 719 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
DHFR-206ENST00000513048 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 LY9Q9HBG7 655 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SENP2Q9HC62 589 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 SH2B1Q9NRF2 756 aaPredicted RBP11.03□□□□□ -0.64
DHFR-206ENST00000513048 ZNF70Q9UC06 446 aaPredicted RBP11.03□□□□□ -0.64
DHFR-206ENST00000513048 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
DHFR-206ENST00000513048 BRPF3Q9ULD4 1205 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
DHFR-206ENST00000513048 DDTLA6NHG4 134 aaPredicted RBP11.02□□□□□ -0.65
DHFR-206ENST00000513048 EGFRP00533 1210 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.65
DHFR-206ENST00000513048 RASA1P20936 1047 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 CDK8P49336 464 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 NT5C2P49902 561 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 APOBRQ0VD83 1088 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
DHFR-206ENST00000513048 FKBP1CQ5VVH2 108 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 SGMS1Q86VZ5 419 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 GPC2Q8N158 579 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 ESR2Q92731 530 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 EHD4Q9H223 541 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 MYOZ2Q9NPC6 264 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 PGAP2Q9UHJ9 254 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 ANGEL1Q9UNK9 670 aaKnown RBP11.02□□□□□ -0.65
DHFR-206ENST00000513048 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
DHFR-206ENST00000513048 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
DHFR-206ENST00000513048 WNT10BO00744 389 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 PFKFB2O60825 505 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 PDIA3P30101 505 aaKnown RBP11.01□□□□□ -0.65
DHFR-206ENST00000513048 LIFRP42702 1097 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 CLCN6P51797 869 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 PDE4BQ07343 736 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 C9orf131Q5VYM1 1079 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
DHFR-206ENST00000513048 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 GTF3C6Q969F1 213 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 ZNF274Q96GC6 653 aaPredicted RBP11.01□□□□□ -0.65
DHFR-206ENST00000513048 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
DHFR-206ENST00000513048 RNF181Q9P0P0 153 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms