RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 GRIK5Q16478 980 aa12.08□□□□□ -0.48
CLCN3-208ENST00000512813 APOBEC3HQ6NTF7 200 aaKnown RBP12.08□□□□□ -0.48
CLCN3-208ENST00000512813 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
CLCN3-208ENST00000512813 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-208ENST00000512813 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
CLCN3-208ENST00000512813 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
CLCN3-208ENST00000512813 CHD8Q9HCK8 2581 aa12.08□□□□□ -0.48
CLCN3-208ENST00000512813 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 PHF20L1A8MW92 1017 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 GRXCR1A8MXD5 290 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
CLCN3-208ENST00000512813 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 RASIP1Q5U651 963 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 UTYO14607 1347 aa12.07□□□□□ -0.48
CLCN3-208ENST00000512813 PRRC2BQ5JSZ5 2229 aaKnown RBP12.06□□□□□ -0.48
CLCN3-208ENST00000512813 CLTBP09497 229 aa12.06□□□□□ -0.48
CLCN3-208ENST00000512813 RAG1P15918 1043 aa12.06□□□□□ -0.48
CLCN3-208ENST00000512813 TLE2Q04725 743 aa12.06□□□□□ -0.48
CLCN3-208ENST00000512813 MORN1Q5T089 497 aa12.06□□□□□ -0.48
CLCN3-208ENST00000512813 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
CLCN3-208ENST00000512813 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLCN3-208ENST00000512813 MRIQ9BWK5 157 aa12.06□□□□□ -0.48
CLCN3-208ENST00000512813 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 PABPC4Q13310 644 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLCN3-208ENST00000512813 ERMP1Q7Z2K6 904 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 ARRDC4Q8NCT1 418 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 PLA2G12BQ9BX93 195 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 ASCC2Q9H1I8 757 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-208ENST00000512813 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
CLCN3-208ENST00000512813 MSRAQ9UJ68 235 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 A0A0G2JMZ2 1700 aa12.05□□□□□ -0.48
CLCN3-208ENST00000512813 CHL1O00533 1208 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 ALADP13716 330 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-208ENST00000512813 MAPK4P31152 587 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 TCP10Q12799 353 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 BRWD1Q9NSI6 2320 aa12.04□□□□□ -0.48
CLCN3-208ENST00000512813 IGKV5-2P06315 115 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 CSF1RP07333 972 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 HIBADHP31937 336 aaKnown RBP12.03□□□□□ -0.48
CLCN3-208ENST00000512813 HHIPL2Q6UWX4 724 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 TBC1D22AQ8WUA7 517 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 GBF1Q92538 1859 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 MAST3O60307 1309 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 DCHS1Q96JQ0 3298 aa12.03□□□□□ -0.48
CLCN3-208ENST00000512813 CNGA1P29973 690 aa12.02□□□□□ -0.49
CLCN3-208ENST00000512813 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
CLCN3-208ENST00000512813 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
CLCN3-208ENST00000512813 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
CLCN3-208ENST00000512813 HLA-CQ95604 372 aa12.02□□□□□ -0.49
CLCN3-208ENST00000512813 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 ANKRD18BA2A2Z9 1011 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 H7C1W4 665 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 CTNND1O60716 968 aaKnown RBP12.01□□□□□ -0.49
CLCN3-208ENST00000512813 PPP2R1AP30153 589 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 ADCYAP1R1P41586 468 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 GYG1P46976 350 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 NFIAQ12857 509 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 TMEM240Q5SV17 173 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 CCDC84Q86UT8 332 aaPredicted RBP12.01□□□□□ -0.49
CLCN3-208ENST00000512813 GJD3Q8N144 294 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 FAM84BQ96KN1 310 aaPredicted RBP12.01□□□□□ -0.49
CLCN3-208ENST00000512813 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 FLRT1Q9NZU1 646 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
CLCN3-208ENST00000512813 YBX2Q9Y2T7 364 aaKnown RBP12.01□□□□□ -0.49
CLCN3-208ENST00000512813 MTCH2Q9Y6C9 303 aa12.01□□□□□ -0.49
CLCN3-208ENST00000512813 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
CLCN3-208ENST00000512813 CHD6Q8TD26 2715 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 GFRA3O60609 400 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 KRT37O76014 449 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 DDX58O95786 925 aaKnown RBP12□□□□□ -0.49
CLCN3-208ENST00000512813 CYBAP13498 195 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 MAP3K10Q02779 954 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 MAP2K5Q13163 448 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 PLEKHH3Q7Z736 793 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 TRPV1Q8NER1 839 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 PORCNQ9H237 461 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 TMEM39AQ9NV64 488 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 SUGT1Q9Y2Z0 365 aa12□□□□□ -0.49
CLCN3-208ENST00000512813 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
CLCN3-208ENST00000512813 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
CLCN3-208ENST00000512813 PTPN5P54829 565 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 HMGCS2P54868 508 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 RIPK4P57078 832 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLCN3-208ENST00000512813 DUSP27Q5VZP5 1158 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms