RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 CRACR2BQ8N4Y2 399 aaPredicted RBP19.21■□□□□ 0.67
DDX41-214ENST00000512334 KBTBD3Q8NAB2 608 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 PI4K2BQ8TCG2 481 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 ARMT1Q9H993 441 aa19.21■□□□□ 0.67
DDX41-214ENST00000512334 HERC5Q9UII4 1024 aaKnown RBP19.21■□□□□ 0.67
DDX41-214ENST00000512334 MYH1P12882 1939 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 CCL15-CCL14A0A0B4J2E2 113 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 IRF6O14896 467 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
DDX41-214ENST00000512334 MBD4O95243 580 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 TBC1D8O95759 1140 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 ALDH1A1P00352 501 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 CCL15Q16663 113 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 MS4A4AQ96JQ5 239 aa19.2■□□□□ 0.66
DDX41-214ENST00000512334 LAMB1P07942 1786 aa19.19■□□□□ 0.66
DDX41-214ENST00000512334 IGF2BP3O00425 579 aaKnown RBP eCLIP19.19■□□□□ 0.66
DDX41-214ENST00000512334 SNAPC2Q13487 334 aa19.19■□□□□ 0.66
DDX41-214ENST00000512334 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
DDX41-214ENST00000512334 DOCK1Q14185 1865 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 TESPA1A2RU30 521 aaPredicted RBP19.18■□□□□ 0.66
DDX41-214ENST00000512334 CETPP11597 493 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 FOXP4Q8IVH2 680 aaPredicted RBP19.18■□□□□ 0.66
DDX41-214ENST00000512334 SDR42E1Q8WUS8 393 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 BRI3BPQ8WY22 251 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 FSD1Q9BTV5 496 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 ZHX2Q9Y6X8 837 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 SIPA1L1O43166 1804 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 NAV1Q8NEY1 1877 aa19.18■□□□□ 0.66
DDX41-214ENST00000512334 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
DDX41-214ENST00000512334 PTPRAP18433 802 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 PDE1AP54750 535 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
DDX41-214ENST00000512334 TTC6Q86TZ1 520 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 PTPN18Q99952 460 aa19.17■□□□□ 0.66
DDX41-214ENST00000512334 PUS7LQ9H0K6 701 aaKnown RBP19.17■□□□□ 0.66
DDX41-214ENST00000512334 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.17■□□□□ 0.66
DDX41-214ENST00000512334 RNF113AO15541 343 aaKnown RBP19.16■□□□□ 0.66
DDX41-214ENST00000512334 ZFYP08048 801 aaPredicted RBP19.16■□□□□ 0.66
DDX41-214ENST00000512334 NUCB1Q02818 461 aa19.16■□□□□ 0.66
DDX41-214ENST00000512334 DCP1AQ9NPI6 582 aaPredicted RBP19.16■□□□□ 0.66
DDX41-214ENST00000512334 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
DDX41-214ENST00000512334 STAP2Q9UGK3 403 aa19.16■□□□□ 0.66
DDX41-214ENST00000512334 PRKAB2O43741 272 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 CAP2P40123 477 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 CCDC84Q86UT8 332 aaPredicted RBP19.15■□□□□ 0.66
DDX41-214ENST00000512334 APPBP2Q92624 585 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 DNAJC18Q9H819 358 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 SERPINB13Q9UIV8 391 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 KCNH4Q9UQ05 1017 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
DDX41-214ENST00000512334 ATAD5Q96QE3 1844 aa19.14■□□□□ 0.65
DDX41-214ENST00000512334 PLCD1P51178 756 aa19.14■□□□□ 0.65
DDX41-214ENST00000512334 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
DDX41-214ENST00000512334 METTL16Q86W50 562 aaKnown RBP19.14■□□□□ 0.65
DDX41-214ENST00000512334 R3HDMLQ9H3Y0 253 aa19.14■□□□□ 0.65
DDX41-214ENST00000512334 DDX60LQ5H9U9 1706 aaKnown RBP19.14■□□□□ 0.65
DDX41-214ENST00000512334 TRIM75PA6NK02 468 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 BTBD19C9JJ37 291 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 GPR25O00155 361 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 CXCL11O14625 94 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 GDF11O95390 407 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 CRHR2Q13324 411 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 TAF1CQ15572 869 aaPredicted RBP19.13■□□□□ 0.65
DDX41-214ENST00000512334 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 OSBP2Q969R2 916 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 CFHR5Q9BXR6 569 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 EHD4Q9H223 541 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 ATP8A2Q9NTI2 1148 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 AFG3L2Q9Y4W6 797 aa19.13■□□□□ 0.65
DDX41-214ENST00000512334 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
DDX41-214ENST00000512334 ZNF296Q8WUU4 475 aaPredicted RBP19.12■□□□□ 0.65
DDX41-214ENST00000512334 EVI5LQ96CN4 794 aa19.12■□□□□ 0.65
DDX41-214ENST00000512334 USP17L5A8MUK1 530 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 TRIM6-TRIM34B2RNG4 842 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 ASNSP08243 561 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 CYP2D6P10635 497 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 STRBPQ96SI9 672 aaKnown RBP19.11■□□□□ 0.65
DDX41-214ENST00000512334 ZFYVE28Q9HCC9 887 aa19.11■□□□□ 0.65
DDX41-214ENST00000512334 BAZ2AQ9UIF9 1905 aaKnown RBP19.11■□□□□ 0.65
DDX41-214ENST00000512334 PHIPQ8WWQ0 1821 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 M0R2C6 588 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 GPAA1O43292 621 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 FKTNO75072 461 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 CERKLQ49MI3 558 aaPredicted RBP19.1■□□□□ 0.65
DDX41-214ENST00000512334 FASTKD5Q7L8L6 764 aaKnown RBP19.1■□□□□ 0.65
DDX41-214ENST00000512334 PLEKHM2Q8IWE5 1019 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 ZNF280CQ8ND82 737 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 AS3MTQ9HBK9 375 aa19.1■□□□□ 0.65
DDX41-214ENST00000512334 A0A0G2JLL6 359 aaPredicted RBP19.09■□□□□ 0.65
DDX41-214ENST00000512334 USP17L12C9JPN9 530 aa19.09■□□□□ 0.65
DDX41-214ENST00000512334 USP17L21D6R901 530 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms