RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 ANKLE2Q86XL3 938 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.28□□□□□ -1.24
MSH3-202ENST00000512258 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 DZANK1Q9NVP4 752 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 TIMELESSQ9UNS1 1208 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 EID1Q9Y6B2 187 aa7.28□□□□□ -1.24
MSH3-202ENST00000512258 ADAMTS13Q76LX8 1427 aa7.27□□□□□ -1.24
MSH3-202ENST00000512258 POLR1AO95602 1720 aaPredicted RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 SOX1O00570 391 aaPredicted RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 FLIIQ13045 1269 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 NUTM2GQ5VZR2 741 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 TMEM132EQ6IEE7 984 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 C2CD4AQ8NCU7 369 aaPredicted RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 FAM13BQ9NYF5 915 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 FNDC3AQ9Y2H6 1198 aaKnown RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 PLEKHG1Q9ULL1 1385 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 SETD1AO15047 1707 aaKnown RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 TRPM1Q7Z4N2 1603 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 ALKQ9UM73 1620 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 ASXL1Q8IXJ9 1541 aa7.27□□□□□ -1.25
MSH3-202ENST00000512258 NPHP4O75161 1426 aaPredicted RBP7.27□□□□□ -1.25
MSH3-202ENST00000512258 SETBP1Q9Y6X0 1596 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 MED14O60244 1454 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 METP08581 1390 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 ZNF574Q6ZN55 896 aaPredicted RBP7.26□□□□□ -1.25
MSH3-202ENST00000512258 VN1R5Q7Z5H4 357 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 TBC1D32Q96NH3 1257 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 C14orf93Q9H972 538 aaKnown RBP7.26□□□□□ -1.25
MSH3-202ENST00000512258 ELP3Q9H9T3 547 aa7.26□□□□□ -1.25
MSH3-202ENST00000512258 BCL7CQ8WUZ0 217 aaPredicted RBP7.25□□□□□ -1.25
MSH3-202ENST00000512258 CYP4F12Q9HCS2 524 aa7.25□□□□□ -1.25
MSH3-202ENST00000512258 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
MSH3-202ENST00000512258 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 FAM177BA6PVY3 158 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 PDE2AO00408 941 aaPredicted RBP7.24□□□□□ -1.25
MSH3-202ENST00000512258 PRMT3O60678 531 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 ZEB1P37275 1124 aaPredicted RBP7.24□□□□□ -1.25
MSH3-202ENST00000512258 PDE12Q6L8Q7 609 aaKnown RBP7.24□□□□□ -1.25
MSH3-202ENST00000512258 SPRED2Q7Z698 418 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 CILP2Q8IUL8 1156 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 CLUAP1Q96AJ1 413 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 STK26Q9P289 416 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 PTPRUQ92729 1446 aa7.24□□□□□ -1.25
MSH3-202ENST00000512258 ROCK2O75116 1388 aaKnown RBP7.23□□□□□ -1.25
MSH3-202ENST00000512258 ZNF792Q3KQV3 632 aa7.23□□□□□ -1.25
MSH3-202ENST00000512258 C1orf127Q8N9H9 656 aa7.23□□□□□ -1.25
MSH3-202ENST00000512258 TBX22Q9Y458 520 aa7.23□□□□□ -1.25
MSH3-202ENST00000512258 KIAA1210Q9ULL0 1709 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 ARL4DP49703 201 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 SOX4Q06945 474 aaPredicted RBP7.22□□□□□ -1.25
MSH3-202ENST00000512258 SWI5Q1ZZU3 235 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 ZNF765Q7L2R6 523 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 PROSER2Q86WR7 435 aaPredicted RBP7.22□□□□□ -1.25
MSH3-202ENST00000512258 TMEM102Q8N9M5 508 aaPredicted RBP7.22□□□□□ -1.25
MSH3-202ENST00000512258 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
MSH3-202ENST00000512258 CARD11Q9BXL7 1154 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 USP26Q9BXU7 913 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 NRSN2Q9GZP1 204 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 LAMC1P11047 1609 aa7.22□□□□□ -1.25
MSH3-202ENST00000512258 GPRASP1Q5JY77 1395 aa7.21□□□□□ -1.25
MSH3-202ENST00000512258 DIP2AQ14689 1571 aa7.21□□□□□ -1.25
MSH3-202ENST00000512258 STRCP1A6NGW2 1772 aa7.21□□□□□ -1.25
MSH3-202ENST00000512258 YTHDC2Q9H6S0 1430 aaKnown RBP7.21□□□□□ -1.25
MSH3-202ENST00000512258 FARP2O94887 1054 aaPredicted RBP7.21□□□□□ -1.26
MSH3-202ENST00000512258 USP11P51784 963 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 NAA30Q147X3 362 aaPredicted RBP7.21□□□□□ -1.26
MSH3-202ENST00000512258 TMEM132AQ24JP5 1023 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 EXOSC6Q5RKV6 272 aaKnown RBP7.21□□□□□ -1.26
MSH3-202ENST00000512258 GLIS3Q8NEA6 775 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 NXPE3Q969Y0 559 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.26
MSH3-202ENST00000512258 CHRDQ9H2X0 955 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 AMOTL2Q9Y2J4 779 aa7.21□□□□□ -1.26
MSH3-202ENST00000512258 ZNF335Q9H4Z2 1342 aaPredicted RBP7.21□□□□□ -1.26
MSH3-202ENST00000512258 LRPPRCP42704 1394 aaKnown RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 PLEKHH1Q9ULM0 1364 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 KCNA6P17658 529 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 SAFB2Q14151 953 aaKnown RBP eCLIP7.2□□□□□ -1.26
MSH3-202ENST00000512258 IKBKEQ14164 716 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 WAPLQ7Z5K2 1190 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 NUDT16Q96DE0 195 aaKnown RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 SOX17Q9H6I2 414 aaPredicted RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 LRRC4CQ9HCJ2 640 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 STIM2Q9P246 746 aa7.2□□□□□ -1.26
MSH3-202ENST00000512258 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 XRN1Q8IZH2 1706 aaKnown RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 CHD2O14647 1828 aaKnown RBP7.2□□□□□ -1.26
MSH3-202ENST00000512258 HSPA5P11021 654 aaKnown RBP7.19□□□□□ -1.26
MSH3-202ENST00000512258 PLCL1Q15111 1095 aa7.19□□□□□ -1.26
MSH3-202ENST00000512258 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
MSH3-202ENST00000512258 XKR5Q6UX68 686 aa7.19□□□□□ -1.26
MSH3-202ENST00000512258 SEZ6L2Q6UXD5 910 aa7.19□□□□□ -1.26
MSH3-202ENST00000512258 BSNDQ8WZ55 320 aa7.19□□□□□ -1.26
MSH3-202ENST00000512258 MKNK1Q9BUB5 465 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms