RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 BTBD19C9JJ37 291 aa20.03■□□□□ 0.8
DDX41-213ENST00000512027 FKTNO75072 461 aa20.03■□□□□ 0.8
DDX41-213ENST00000512027 CETPP11597 493 aa20.03■□□□□ 0.8
DDX41-213ENST00000512027 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
DDX41-213ENST00000512027 CTU1Q7Z7A3 348 aaKnown RBP20.03■□□□□ 0.8
DDX41-213ENST00000512027 ZNF532Q9HCE3 1301 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 IGSF3O75054 1194 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 PTPRAP18433 802 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 HAUS7Q99871 368 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 RIOK1Q9BRS2 568 aaKnown RBP20.02■□□□□ 0.8
DDX41-213ENST00000512027 DNAJC18Q9H819 358 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 PICK1Q9NRD5 415 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 KCNH4Q9UQ05 1017 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 ZHX2Q9Y6X8 837 aa20.02■□□□□ 0.8
DDX41-213ENST00000512027 TCRBV5S4A2TA0A5A2 114 aa20.01■□□□□ 0.79
DDX41-213ENST00000512027 TBC1D12O60347 775 aa20.01■□□□□ 0.79
DDX41-213ENST00000512027 CTNND1O60716 968 aaKnown RBP20.01■□□□□ 0.79
DDX41-213ENST00000512027 USP5P45974 858 aa20.01■□□□□ 0.79
DDX41-213ENST00000512027 MOGSQ13724 837 aa20.01■□□□□ 0.79
DDX41-213ENST00000512027 SHROOM1Q2M3G4 852 aaPredicted RBP20.01■□□□□ 0.79
DDX41-213ENST00000512027 NOM1Q5C9Z4 860 aaKnown RBP20.01■□□□□ 0.79
DDX41-213ENST00000512027 MAGEB6P1A0A0J9YX57 407 aa20■□□□□ 0.79
DDX41-213ENST00000512027 CAP1Q01518 475 aa20■□□□□ 0.79
DDX41-213ENST00000512027 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
DDX41-213ENST00000512027 CCDC85CA6NKD9 419 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 JAG1P78504 1218 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 LCORLQ8N3X6 602 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 CD99L2Q8TCZ2 262 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 DHX36Q9H2U1 1008 aaKnown RBP19.99■□□□□ 0.79
DDX41-213ENST00000512027 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 AFG3L2Q9Y4W6 797 aa19.99■□□□□ 0.79
DDX41-213ENST00000512027 BAZ2AQ9UIF9 1905 aaKnown RBP19.99■□□□□ 0.79
DDX41-213ENST00000512027 TRIM75PA6NK02 468 aa19.98■□□□□ 0.79
DDX41-213ENST00000512027 ADD2P35612 726 aa19.98■□□□□ 0.79
DDX41-213ENST00000512027 EVX2Q03828 476 aa19.98■□□□□ 0.79
DDX41-213ENST00000512027 CRACR2BQ8N4Y2 399 aaPredicted RBP19.98■□□□□ 0.79
DDX41-213ENST00000512027 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
DDX41-213ENST00000512027 ZFYVE28Q9HCC9 887 aa19.98■□□□□ 0.79
DDX41-213ENST00000512027 HERC5Q9UII4 1024 aaKnown RBP19.98■□□□□ 0.79
DDX41-213ENST00000512027 PDHXO00330 501 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 GDF11O95390 407 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 CAP2P40123 477 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 LOC285556D6RIA3 1793 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 HTTP42858 3142 aa19.97■□□□□ 0.79
DDX41-213ENST00000512027 A0A0G2JLL6 359 aaPredicted RBP19.96■□□□□ 0.79
DDX41-213ENST00000512027 CXCL11O14625 94 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 ECM2O94769 699 aaPredicted RBP19.96■□□□□ 0.79
DDX41-213ENST00000512027 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 GPAT2Q6NUI2 795 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 GADL1Q6ZQY3 521 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 PRRT2Q7Z6L0 340 aaPredicted RBP19.96■□□□□ 0.79
DDX41-213ENST00000512027 ANKRD23Q86SG2 305 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 SDR42E1Q8WUS8 393 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 TRIM34Q9BYJ4 488 aa19.96■□□□□ 0.79
DDX41-213ENST00000512027 PRKAB2O43741 272 aa19.95■□□□□ 0.78
DDX41-213ENST00000512027 MBD4O95243 580 aa19.95■□□□□ 0.78
DDX41-213ENST00000512027 SP3Q02447 781 aa19.95■□□□□ 0.78
DDX41-213ENST00000512027 TMED8Q6PL24 325 aaPredicted RBP19.95■□□□□ 0.78
DDX41-213ENST00000512027 METTL16Q86W50 562 aaKnown RBP19.95■□□□□ 0.78
DDX41-213ENST00000512027 CERS3Q8IU89 383 aa19.95■□□□□ 0.78
DDX41-213ENST00000512027 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
DDX41-213ENST00000512027 SUPT16HQ9Y5B9 1047 aaKnown RBP19.95■□□□□ 0.78
DDX41-213ENST00000512027 TLR2O60603 784 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 CYP2C8P10632 490 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 PLCD1P51178 756 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 FOXP4Q8IVH2 680 aaPredicted RBP19.94■□□□□ 0.78
DDX41-213ENST00000512027 GPATCH3Q96I76 525 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 CRNKL1Q9BZJ0 848 aaKnown RBP19.94■□□□□ 0.78
DDX41-213ENST00000512027 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.94■□□□□ 0.785e-6■■□□□ 11.5
DDX41-213ENST00000512027 CPA4Q9UI42 421 aa19.94■□□□□ 0.78
DDX41-213ENST00000512027 CYP2D6P10635 497 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 SPP2Q13103 211 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 ANKRD45Q5TZF3 282 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 ERO1AQ96HE7 468 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 ARHGAP39Q9C0H5 1083 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 ZCCHC17Q9NP64 241 aaKnown RBP19.93■□□□□ 0.78
DDX41-213ENST00000512027 HPS5Q9UPZ3 1129 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 MYH8P13535 1937 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 ADGRA2Q96PE1 1338 aa19.93■□□□□ 0.78
DDX41-213ENST00000512027 TREML2Q5T2D2 321 aa19.92■□□□□ 0.78
DDX41-213ENST00000512027 PI4K2BQ8TCG2 481 aa19.92■□□□□ 0.78
DDX41-213ENST00000512027 PUS7LQ9H0K6 701 aaKnown RBP19.92■□□□□ 0.78
DDX41-213ENST00000512027 DCP1AQ9NPI6 582 aaPredicted RBP19.92■□□□□ 0.78
DDX41-213ENST00000512027 MCM9Q9NXL9 1143 aa19.92■□□□□ 0.78
DDX41-213ENST00000512027 USP17L5A8MUK1 530 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 SMIM22K7EJ46 135 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 POLR3DP05423 398 aaPredicted RBP19.91■□□□□ 0.78
DDX41-213ENST00000512027 HMGCS2P54868 508 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
DDX41-213ENST00000512027 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
DDX41-213ENST00000512027 UBE3CQ15386 1083 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 FBXO46Q6PJ61 603 aaPredicted RBP19.91■□□□□ 0.78
DDX41-213ENST00000512027 KBTBD3Q8NAB2 608 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 ZNF280CQ8ND82 737 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 ZBTB21Q9ULJ3 1066 aa19.91■□□□□ 0.78
DDX41-213ENST00000512027 SALL3Q9BXA9 1300 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms