RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 HERC5Q9UII4 1024 aaKnown RBP19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 AFG3L2Q9Y4W6 797 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 COL2A1P02458 1487 aaPredicted RBP19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 CHGBP05060 677 aa19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 MOGSQ13724 837 aa19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 UBE3CQ15386 1083 aa19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-216ENST00000511767 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 BTBD19C9JJ37 291 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 CAP2P40123 477 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 USP5P45974 858 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 CRHR2Q13324 411 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 TSHZ3Q63HK5 1081 aa19.53■□□□□ 0.72
PDLIM5-216ENST00000511767 FKTNO75072 461 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 IGHDP01880 384 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 DGKZQ13574 1117 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 RWDD1Q9H446 243 aaPredicted RBP19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
PDLIM5-216ENST00000511767 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 JAG1P78504 1218 aa19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
PDLIM5-216ENST00000511767 PLCD1P51178 756 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 ZSCAN25Q6NSZ9 544 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 ANKRD23Q86SG2 305 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 TTC6Q86TZ1 520 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 KBTBD3Q8NAB2 608 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 ABHD8Q96I13 439 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 CRNKL1Q9BZJ0 848 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 ZFYVE28Q9HCC9 887 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 SALL3Q9BXA9 1300 aa19.5■□□□□ 0.71
PDLIM5-216ENST00000511767 DOCK2Q92608 1830 aa19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 A0A0G2JLL6 359 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 PRKAB2O43741 272 aa19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 HLA-DOAP06340 250 aa19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 TATDN1Q6P1N9 297 aa19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 PRRT2Q7Z6L0 340 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 PUS7LQ9H0K6 701 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
PDLIM5-216ENST00000511767 ERC2O15083 957 aa19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 SPP2Q13103 211 aa19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 FASTKD5Q7L8L6 764 aaKnown RBP19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 SDR42E1Q8WUS8 393 aa19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 EHD4Q9H223 541 aa19.48■□□□□ 0.71
PDLIM5-216ENST00000511767 USP17L5A8MUK1 530 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 PDHXO00330 501 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 TLR2O60603 784 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 MBD4O95243 580 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 POLR3DP05423 398 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 MX1P20591 662 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 SP3Q02447 781 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 ATP8A2Q9NTI2 1148 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 GINM1Q9NU53 330 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 SERPINB13Q9UIV8 391 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 LAMB1P07942 1786 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 MAST2Q6P0Q8 1798 aa19.47■□□□□ 0.71
PDLIM5-216ENST00000511767 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 GABPAQ06546 454 aa19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 ZNF280CQ8ND82 737 aa19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 STRBPQ96SI9 672 aaKnown RBP19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 WDR18Q9BV38 432 aa19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
PDLIM5-216ENST00000511767 CDK5RAP2Q96SN8 1893 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 CAPN15O75808 1086 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 ASNSP08243 561 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 PDE1AP54750 535 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 CAP1Q01518 475 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 EVX2Q03828 476 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 PKN2Q16513 984 aaKnown RBP19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 SHROOM1Q2M3G4 852 aaPredicted RBP19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 B4GALNT3Q6L9W6 998 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 C17orf99Q6UX52 265 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 OSBP2Q969R2 916 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 TRIM34Q9BYJ4 488 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 TBC1D2Q9BYX2 928 aa19.45■□□□□ 0.7
PDLIM5-216ENST00000511767 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
PDLIM5-216ENST00000511767 GDF11O95390 407 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 CYP2D6P10635 497 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 SHMT1P34896 483 aa19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
PDLIM5-216ENST00000511767 NUCB1Q02818 461 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms