RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	ORC3	Q9UBD5	711 aa	Predicted RBP	10.94	□□□□□ -0.66
IFT122-223	ENST00000511498	GOLGA8A	A7E2F4	631 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	IFIT3	O14879	490 aa	Known RBP	10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	CCDC192	P0DO97	292 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	FDPS	P14324	419 aa	Known RBP	10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	TM4SF1	P30408	202 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	C1QBP	Q07021	282 aa	Known RBP	10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	MAP3K11	Q16584	847 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	NFXL1	Q6ZNB6	911 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	ZNF804A	Q7Z570	1209 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	FBXO18	Q8NFZ0	1043 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	BICD2	Q8TD16	824 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	IGDCC4	Q8TDY8	1250 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	ESR2	Q92731	530 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	RIOK1	Q9BRS2	568 aa	Known RBP	10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	MCOLN1	Q9GZU1	580 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	LY9	Q9HBG7	655 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	RCOR1	Q9UKL0	485 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	SLC12A7	Q9Y666	1083 aa		10.93	□□□□□ -0.66
IFT122-223	ENST00000511498	DDX60L	Q5H9U9	1706 aa	Known RBP	10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	IRS2	Q9Y4H2	1338 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	ANKRD31	Q8N7Z5	1873 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	CDK5RAP2	Q96SN8	1893 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	CTAGE5	O15320	804 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	KDM4A	O75164	1064 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	YEATS4	O95619	227 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	SLC3A2	P08195	630 aa	Known RBP	10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	POTEI	P0CG38	1075 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	POTEJ	P0CG39	1038 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	GSTO1	P78417	241 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	RASSF7	Q02833	373 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	TRIM29	Q14134	588 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	WTAP	Q15007	396 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	CRY2	Q49AN0	593 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	MIGA1	Q8NAN2	632 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	WDR66	Q8TBY9	1149 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	RPGR	Q92834	1020 aa	Known RBP	10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	RBM17	Q96I25	401 aa	Known RBP	10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	CLSTN2	Q9H4D0	955 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	ATP8A2	Q9NTI2	1148 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	FOCAD	Q5VW36	1801 aa		10.92	□□□□□ -0.66
IFT122-223	ENST00000511498	TMEM88B	A6NKF7	163 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	CAVIN2	O95810	425 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	LMNB1	P20700	586 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	IARS	P41252	1262 aa	Known RBP	10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	CTDSPL2	Q05D32	466 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	PRR5L	Q6MZQ0	368 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	FAM173B	Q6P4H8	233 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	CCDC73	Q6ZRK6	1079 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	RBM43	Q6ZSC3	357 aa	Known RBP	10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	MICU3	Q86XE3	530 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	TRIM22	Q8IYM9	498 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	KCNG4	Q8TDN1	519 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	NSUN4	Q96CB9	384 aa	Known RBP	10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	UBAC1	Q9BSL1	405 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	FUCA2	Q9BTY2	467 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	TNMD	Q9H2S6	317 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	GPHN	Q9NQX3	736 aa	Predicted RBP	10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	TOMM22	Q9NS69	142 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	POLR3E	Q9NVU0	708 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	RTEL1	Q9NZ71	1219 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	ZSWIM5	Q9P217	1185 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.91	□□□□□ -0.66
IFT122-223	ENST00000511498	MYH2	Q9UKX2	1941 aa		10.91	□□□□□ -0.66
IFT122-223	ENST00000511498		A0A1W2PQ27	194 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498		A0A1W2PQ64	194 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498		A0A1W2PQD8	194 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	PRKAB2	O43741	272 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	FMNL1	O95466	1100 aa	Predicted RBP	10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	FGR	P09769	529 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	CALM1	P0DP23	149 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	CALM2	P0DP24	149 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	CALM3	P0DP25	149 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	GYS1	P13807	737 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	IFNAR1	P17181	557 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ATP2B4	P23634	1241 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ADD1	P35611	737 aa	Known RBP	10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	MECOM	Q03112	1051 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	SSRP1	Q08945	709 aa	Known RBP	10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	SBK1	Q52WX2	424 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ADGRA1	Q86SQ6	560 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	IQCA1	Q86XH1	822 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	DZIP1	Q86YF9	867 aa	Known RBP	10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ALG1	Q9BT22	464 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ANKIB1	Q9P2G1	1089 aa		10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	TFIP11	Q9UBB9	837 aa	Known RBP	10.9	□□□□□ -0.66
IFT122-223	ENST00000511498	ROBO3	Q96MS0	1386 aa		10.9	□□□□□ -0.67
IFT122-223	ENST00000511498	ORC4	O43929	436 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	BBOX1	O75936	387 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	SERPINB2	P05120	415 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	LDHC	P07864	332 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	LIG1	P18858	919 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	KIF23	Q02241	960 aa	Predicted RBP	10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	NTRK3	Q16288	839 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	RTN1	Q16799	776 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	RRP12	Q5JTH9	1297 aa	Known RBP	10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	MYSM1	Q5VVJ2	828 aa		10.89	□□□□□ -0.67
IFT122-223	ENST00000511498	AMOTL1	Q8IY63	956 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms