RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 PMFBP1Q8TBY8 1022 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 CRIM1Q9NZV1 1036 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 DCDC2CA8MYV0 355 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 FANCGO15287 622 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 PROCP04070 461 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 SERINC3Q13530 473 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 LSRQ86X29 649 aaPredicted RBP8.51□□□□□ -1.05
CHD1-206ENST00000511067 C19orf47Q8N9M1 422 aaKnown RBP8.51□□□□□ -1.05
CHD1-206ENST00000511067 WNT10AQ9GZT5 417 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 OSBPL2Q9H1P3 480 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 HIF3AQ9Y2N7 669 aa8.51□□□□□ -1.05
CHD1-206ENST00000511067 SMAD7O15105 426 aaKnown RBP8.5□□□□□ -1.05
CHD1-206ENST00000511067 KLF4O43474 513 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 SPATA31C1P0DKV0 1188 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 ADH5P11766 374 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 CCDC144BQ3MJ40 725 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 AKAP4Q5JQC9 854 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 ANKRD34AQ69YU3 496 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
CHD1-206ENST00000511067 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
CHD1-206ENST00000511067 TMEM40Q8WWA1 233 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 TM9SF2Q99805 663 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 ATXN3LQ9H3M9 355 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 GMIPQ9P107 970 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 SIRPGQ9P1W8 387 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 REV1Q9UBZ9 1251 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 PPP1R9AQ9ULJ8 1098 aa8.5□□□□□ -1.05
CHD1-206ENST00000511067 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
CHD1-206ENST00000511067 PRAMEF27A3QJZ7 478 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 TIAF1O95411 115 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 PLCG1P19174 1290 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 RAB33AQ14088 237 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 ZBTB37Q5TC79 503 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 C12orf40Q86WS4 652 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 FAM169BQ8N8A8 192 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 RNF214Q8ND24 703 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 MKL1Q969V6 931 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 TRIM55Q9BYV6 548 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 GSX1Q9H4S2 264 aaPredicted RBP8.49□□□□□ -1.05
CHD1-206ENST00000511067 CORINQ9Y5Q5 1042 aa8.49□□□□□ -1.05
CHD1-206ENST00000511067 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
CHD1-206ENST00000511067 GRK4P32298 578 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 CASP7P55210 303 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 SOX4Q06945 474 aaPredicted RBP8.48□□□□□ -1.05
CHD1-206ENST00000511067 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 KCT2Q8NC54 265 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 HNRNPLLQ8WVV9 542 aaKnown RBP8.48□□□□□ -1.05
CHD1-206ENST00000511067 FANCD2OSQ96PS1 177 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 NACC1Q96RE7 527 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 PICK1Q9NRD5 415 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
CHD1-206ENST00000511067 C1QTNF9BB2RNN3 333 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
CHD1-206ENST00000511067 PGRP06401 933 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 NTF4P34130 210 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 ETF1P62495 437 aaKnown RBP8.47□□□□□ -1.05
CHD1-206ENST00000511067 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 FDX2Q6P4F2 183 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
CHD1-206ENST00000511067 DISC1Q9NRI5 854 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 ACTR10Q9NZ32 417 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 CSADQ9Y600 493 aa8.47□□□□□ -1.05
CHD1-206ENST00000511067 GUCY2CP25092 1073 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
CHD1-206ENST00000511067 CDCP2Q5VXM1 449 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 INTS3Q68E01 1043 aaKnown RBP8.46□□□□□ -1.06
CHD1-206ENST00000511067 OVOS1Q6IE37 1185 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 Q6ZS46 218 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 ZNF507Q8TCN5 953 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 AKTIPQ9H8T0 292 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 SLC12A7Q9Y666 1083 aa8.46□□□□□ -1.06
CHD1-206ENST00000511067 SLC22A31A6NKX4 558 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 CAP2P40123 477 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 LRP10Q7Z4F1 713 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 CD163Q86VB7 1156 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 HID1Q8IV36 788 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 MCATQ8IVS2 390 aaKnown RBP8.45□□□□□ -1.06
CHD1-206ENST00000511067 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
CHD1-206ENST00000511067 C12orf50Q8NA57 414 aaPredicted RBP8.45□□□□□ -1.06
CHD1-206ENST00000511067 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
CHD1-206ENST00000511067 CEP41Q9BYV8 373 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 CNNM2Q9H8M5 875 aa8.45□□□□□ -1.06
CHD1-206ENST00000511067 C9orf172C9J069 976 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 TNFRSF10CO14798 259 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 NME1P15531 152 aaKnown RBP8.44□□□□□ -1.06
CHD1-206ENST00000511067 CHRNA4P43681 627 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 YARSP54577 528 aaKnown RBP8.44□□□□□ -1.06
CHD1-206ENST00000511067 GRIK4Q16099 956 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 SLC6A19Q695T7 634 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 SHISA2Q6UWI4 295 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 SLFN12Q8IYM2 578 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 C2CD4AQ8NCU7 369 aaPredicted RBP8.44□□□□□ -1.06
CHD1-206ENST00000511067 ATG4CQ96DT6 458 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 PIDD1Q9HB75 910 aa8.44□□□□□ -1.06
CHD1-206ENST00000511067 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms