RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 KCNJ4P48050 445 aa12.39□□□□□ -0.43
PTPN20-221ENST00000509599 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
PTPN20-221ENST00000509599 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
PTPN20-221ENST00000509599 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
PTPN20-221ENST00000509599 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
PTPN20-221ENST00000509599 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
PTPN20-221ENST00000509599 CHRNDQ07001 517 aa12.38□□□□□ -0.43
PTPN20-221ENST00000509599 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
PTPN20-221ENST00000509599 COA7Q96BR5 231 aa12.38□□□□□ -0.43
PTPN20-221ENST00000509599 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
PTPN20-221ENST00000509599 RLFQ13129 1914 aa12.38□□□□□ -0.43
PTPN20-221ENST00000509599 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 CRKP46108 304 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
PTPN20-221ENST00000509599 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
PTPN20-221ENST00000509599 TAF5LO75529 589 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
PTPN20-221ENST00000509599 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-221ENST00000509599 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 REV3LO60673 3130 aa12.36□□□□□ -0.43
PTPN20-221ENST00000509599 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-221ENST00000509599 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-221ENST00000509599 CHL1O00533 1208 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 CXCL11O14625 94 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 HOXB7P09629 217 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 GRIK5Q16478 980 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 FAM83AQ86UY5 434 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 TRIB2Q92519 343 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-221ENST00000509599 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
PTPN20-221ENST00000509599 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
PTPN20-221ENST00000509599 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-221ENST00000509599 ITGA6P23229 1130 aa12.34□□□□□ -0.43
PTPN20-221ENST00000509599 RIPK4P57078 832 aa12.34□□□□□ -0.43
PTPN20-221ENST00000509599 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
PTPN20-221ENST00000509599 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
PTPN20-221ENST00000509599 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-221ENST00000509599 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-221ENST00000509599 MAPK8IP3Q9UPT6 1336 aa12.34□□□□□ -0.43
PTPN20-221ENST00000509599 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
PTPN20-221ENST00000509599 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
PTPN20-221ENST00000509599 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
PTPN20-221ENST00000509599 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
PTPN20-221ENST00000509599 WNT2BQ93097 391 aa12.33□□□□□ -0.44
PTPN20-221ENST00000509599 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.44
PTPN20-221ENST00000509599 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 FAM110CQ1W6H9 321 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
PTPN20-221ENST00000509599 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
PTPN20-221ENST00000509599 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
PTPN20-221ENST00000509599 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
PTPN20-221ENST00000509599 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
PTPN20-221ENST00000509599 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-221ENST00000509599 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
PTPN20-221ENST00000509599 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
PTPN20-221ENST00000509599 PPP1R3GB7ZBB8 358 aa12.3□□□□□ -0.44
PTPN20-221ENST00000509599 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
PTPN20-221ENST00000509599 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
PTPN20-221ENST00000509599 BADQ92934 168 aa12.3□□□□□ -0.44
PTPN20-221ENST00000509599 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
PTPN20-221ENST00000509599 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
PTPN20-221ENST00000509599 MRE11P49959 708 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 RTP1P59025 263 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 CACNB2Q08289 660 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-221ENST00000509599 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
PTPN20-221ENST00000509599 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 P2RX7Q99572 595 aaKnown RBP12.29□□□□□ -0.44
PTPN20-221ENST00000509599 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 LAS1LQ9Y4W2 734 aaKnown RBP12.29□□□□□ -0.44
PTPN20-221ENST00000509599 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
PTPN20-221ENST00000509599 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 GBF1Q92538 1859 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 H7C1W4 665 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 CSF1RP07333 972 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 BMP1P13497 986 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 CYP2B6P20813 491 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 DNAJB2P25686 324 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
PTPN20-221ENST00000509599 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
PTPN20-221ENST00000509599 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 ZDHHC15Q96MV8 337 aa12.28□□□□□ -0.44
PTPN20-221ENST00000509599 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms