RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 ZC3H12CQ9C0D7 883 aaKnown RBP5.88□□□□□ -1.47
OTUD4-207ENST00000509517 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
OTUD4-207ENST00000509517 RBAK-RBAKDNI3L0D1 243 aa5.87□□□□□ -1.47
OTUD4-207ENST00000509517 KRTAP10-2P60368 255 aa5.87□□□□□ -1.47
OTUD4-207ENST00000509517 IKZF1Q13422 519 aa5.87□□□□□ -1.47
OTUD4-207ENST00000509517 ARHGAP27Q6ZUM4 889 aa5.87□□□□□ -1.47
OTUD4-207ENST00000509517 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
OTUD4-207ENST00000509517 EPS8L3Q8TE67 593 aaKnown RBP5.87□□□□□ -1.47
OTUD4-207ENST00000509517 WWC3Q9ULE0 1092 aa5.87□□□□□ -1.47
OTUD4-207ENST00000509517 ZNF862O60290 1169 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 LDHBP07195 334 aaKnown RBP5.86□□□□□ -1.47
OTUD4-207ENST00000509517 AFMP43652 599 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 TTLL4Q14679 1199 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 KCNA10Q16322 511 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 EAPPQ56P03 285 aaPredicted RBP5.86□□□□□ -1.47
OTUD4-207ENST00000509517 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 ATG14Q6ZNE5 492 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 FBXO33Q7Z6M2 555 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 FBF1Q8TES7 1133 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 RELTQ969Z4 430 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 KIRREL1Q96J84 757 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 NSUN3Q9H649 340 aaKnown RBP5.86□□□□□ -1.47
OTUD4-207ENST00000509517 CCDC86Q9H6F5 360 aaKnown RBP5.86□□□□□ -1.47
OTUD4-207ENST00000509517 LIN7BQ9HAP6 207 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 CD320Q9NPF0 282 aa5.86□□□□□ -1.47
OTUD4-207ENST00000509517 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
OTUD4-207ENST00000509517 GADD45BO75293 160 aaPredicted RBP5.85□□□□□ -1.47
OTUD4-207ENST00000509517 B3GALT4O96024 378 aa5.85□□□□□ -1.47
OTUD4-207ENST00000509517 HCLS1P14317 486 aaPredicted RBP5.85□□□□□ -1.47
OTUD4-207ENST00000509517 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.85□□□□□ -1.47
OTUD4-207ENST00000509517 ALG1LQ6GMV1 187 aa5.85□□□□□ -1.47
OTUD4-207ENST00000509517 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
OTUD4-207ENST00000509517 FBXO15Q8NCQ5 510 aaPredicted RBP5.85□□□□□ -1.47
OTUD4-207ENST00000509517 EHD4Q9H223 541 aa5.85□□□□□ -1.47
OTUD4-207ENST00000509517 PIDD1Q9HB75 910 aa5.85□□□□□ -1.47
OTUD4-207ENST00000509517 PRPF40AO75400 957 aaKnown RBP5.84□□□□□ -1.47
OTUD4-207ENST00000509517 NEFMP07197 916 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 GRM2Q14416 872 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 NKPD1Q17RQ9 610 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 TMEM67Q5HYA8 995 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 HP1BP3Q5SSJ5 553 aaPredicted RBP5.84□□□□□ -1.47
OTUD4-207ENST00000509517 PRPF40BQ6NWY9 871 aaKnown RBP5.84□□□□□ -1.47
OTUD4-207ENST00000509517 SPACA3Q8IXA5 215 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 NLRP2Q9NX02 1062 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 SMG5Q9UPR3 1016 aaKnown RBP5.84□□□□□ -1.47
OTUD4-207ENST00000509517 PCDHGC5Q9Y5F6 944 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 SNX11Q9Y5W9 270 aa5.84□□□□□ -1.47
OTUD4-207ENST00000509517 SYNGAP1Q96PV0 1343 aa5.83□□□□□ -1.48
OTUD4-207ENST00000509517 ETV2O00321 342 aaPredicted RBP5.83□□□□□ -1.48
OTUD4-207ENST00000509517 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
OTUD4-207ENST00000509517 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
OTUD4-207ENST00000509517 CYFIP1Q7L576 1253 aa5.83□□□□□ -1.48
OTUD4-207ENST00000509517 ABCB6Q9NP58 842 aa5.83□□□□□ -1.48
OTUD4-207ENST00000509517 TRAK1Q9UPV9 953 aa5.83□□□□□ -1.48
OTUD4-207ENST00000509517 A0A0G2JLL6 359 aaPredicted RBP5.82□□□□□ -1.48
OTUD4-207ENST00000509517 FOXD2O60548 495 aaPredicted RBP5.82□□□□□ -1.48
OTUD4-207ENST00000509517 ZNF157P51786 506 aaPredicted RBP5.82□□□□□ -1.48
OTUD4-207ENST00000509517 FGD1P98174 961 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 TAGLNQ01995 201 aaKnown RBP5.82□□□□□ -1.48
OTUD4-207ENST00000509517 ID3Q02535 119 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 GGNQ86UU5 652 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 ASB11Q8WXH4 323 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 DUSP9Q99956 384 aaKnown RBP5.82□□□□□ -1.48
OTUD4-207ENST00000509517 BCO2Q9BYV7 579 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 ZNF576Q9H609 170 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 ZFYVE1Q9HBF4 777 aa5.82□□□□□ -1.48
OTUD4-207ENST00000509517 TMEM238LA0A1B0GVL6 79 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 ITPKAP23677 461 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 GNA15P30679 374 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 CIAPIN1Q6FI81 312 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 NXPE4Q6UWF7 544 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 ATXN3LQ9H3M9 355 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 CARS2Q9HA77 564 aaKnown RBP5.81□□□□□ -1.48
OTUD4-207ENST00000509517 RNF19AQ9NV58 838 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 PCOLCE2Q9UKZ9 415 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 SPG7Q9UQ90 795 aa5.81□□□□□ -1.48
OTUD4-207ENST00000509517 GIPC1O14908 333 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 PTPN12Q05209 780 aaKnown RBP5.8□□□□□ -1.48
OTUD4-207ENST00000509517 ISL2Q96A47 359 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 FRMD6Q96NE9 622 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 OSBPL7Q9BZF2 842 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 C12orf49Q9H741 205 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 PARD6AQ9NPB6 346 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 PODXL2Q9NZ53 605 aa5.8□□□□□ -1.48
OTUD4-207ENST00000509517 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
OTUD4-207ENST00000509517 NUAK1O60285 661 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 FCGRTP55899 365 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 RGS22Q8NE09 1264 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 GIPC2Q8TF65 315 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 SRCIN1Q9C0H9 1055 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 PARP2Q9UGN5 583 aa5.79□□□□□ -1.48
OTUD4-207ENST00000509517 SLFN14P0C7P3 912 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
OTUD4-207ENST00000509517 LINC00310P59036 64 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 DAB2P98082 770 aa5.78□□□□□ -1.48
OTUD4-207ENST00000509517 FAAP100Q0VG06 881 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms