RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 A0A0G2JLL6 359 aaPredicted RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 GRK4P32298 578 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 ZAP70P43403 619 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 FCGRTP55899 365 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 MAP3K10Q02779 954 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 PRRT2Q7Z6L0 340 aaPredicted RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
RNF4-212ENST00000509258 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
RNF4-212ENST00000509258 UQCRFS1P1P0C7P4 283 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 CYP2C8P10632 490 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 BCRP11274 1271 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 PTPRAP18433 802 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 NAV1Q8NEY1 1877 aa13.39□□□□□ -0.27
RNF4-212ENST00000509258 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
RNF4-212ENST00000509258 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF4-212ENST00000509258 UBXN2AP68543 259 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 PRKCZQ05513 592 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 MTFR1Q15390 333 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 SHROOM1Q2M3G4 852 aaPredicted RBP13.38□□□□□ -0.27
RNF4-212ENST00000509258 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 ANTXR1Q9H6X2 564 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
RNF4-212ENST00000509258 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 H0YGN5 161 aa13.37□□□□□ -0.27
RNF4-212ENST00000509258 GJB1P08034 283 aa13.37□□□□□ -0.27
RNF4-212ENST00000509258 GJA8P48165 433 aa13.37□□□□□ -0.27
RNF4-212ENST00000509258 DYNLL1P63167 89 aaKnown RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
RNF4-212ENST00000509258 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 ZNF512BQ96KM6 892 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 AATFQ9NY61 560 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF4-212ENST00000509258 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
RNF4-212ENST00000509258 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
RNF4-212ENST00000509258 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
RNF4-212ENST00000509258 LDHCP07864 332 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 CCL5P13501 91 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 GSTO1P78417 241 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 JAG1P78504 1218 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
RNF4-212ENST00000509258 AACSQ86V21 672 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 DNAJC18Q9H819 358 aa13.36□□□□□ -0.27
RNF4-212ENST00000509258 APBB1O00213 710 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
RNF4-212ENST00000509258 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 RHPN1Q8TCX5 695 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 HTATIP2Q9BUP3 242 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 AGTPBP1Q9UPW5 1226 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 MYH8P13535 1937 aa13.35□□□□□ -0.27
RNF4-212ENST00000509258 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
RNF4-212ENST00000509258 ADCY3O60266 1144 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 TBC1D12O60347 775 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 PPP4CP60510 307 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
RNF4-212ENST00000509258 DPF3Q92784 378 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
RNF4-212ENST00000509258 GABRQQ9UN88 632 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 RANBP2P49792 3224 aaKnown RBP13.34□□□□□ -0.27
RNF4-212ENST00000509258 FLT1P17948 1338 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 PLXNB2O15031 1838 aa13.34□□□□□ -0.27
RNF4-212ENST00000509258 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.28
RNF4-212ENST00000509258 FLT3LGP49771 235 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 EVX2Q03828 476 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 IRF5Q13568 498 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 PROCA1Q8NCQ7 364 aaPredicted RBP13.33□□□□□ -0.28
RNF4-212ENST00000509258 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 TGFBRAP1Q8WUH2 860 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.28
RNF4-212ENST00000509258 TBC1D2Q9BYX2 928 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF4-212ENST00000509258 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
RNF4-212ENST00000509258 DDX19BQ9UMR2 479 aa13.33□□□□□ -0.28
RNF4-212ENST00000509258 IDH1O75874 414 aaKnown RBP13.32□□□□□ -0.28
RNF4-212ENST00000509258 CHGBP05060 677 aa13.32□□□□□ -0.28
RNF4-212ENST00000509258 INHAP05111 366 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms