RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 CXCL11O14625 94 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 HSPA5P11021 654 aaKnown RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 CYP2B6P20813 491 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 FKBP1AP62942 108 aaKnown RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 C9orf50Q5SZB4 431 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 HDGFL1Q5TGJ6 251 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 CCDC129Q6ZRS4 1044 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 ANKRD13CQ8N6S4 541 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 ZDHHC16Q969W1 377 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 RNPC3Q96LT9 517 aaKnown RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 TEPSINQ96N21 525 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 NECAB3Q96P71 396 aaPredicted RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 KCNK17Q96T54 332 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 ZNF576Q9H609 170 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 CWC22Q9HCG8 908 aaKnown RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 GOPCQ9HD26 462 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 GPCPD1Q9NPB8 672 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 PICK1Q9NRD5 415 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 HYPKQ9NX55 129 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 CWC25Q9NXE8 425 aaPredicted RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 CHPF2Q9P2E5 772 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 DBF4Q9UBU7 674 aaPredicted RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 SERPINA10Q9UK55 444 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 LAS1LQ9Y4W2 734 aaKnown RBP4.95□□□□□ -1.62
RNF4-211ENST00000509206 LAMB4A4D0S4 1761 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 LAMB2P55268 1798 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 PFASO15067 1338 aa4.95□□□□□ -1.62
RNF4-211ENST00000509206 SMIM22K7EJ46 135 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 ARHGAP33O14559 1287 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 FRAT2O75474 233 aaPredicted RBP4.94□□□□□ -1.62
RNF4-211ENST00000509206 KLRK1P26718 216 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 INPP5BP32019 993 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 CRKP46108 304 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 CTSWP56202 376 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 RTP1P59025 263 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 TRIM32Q13049 653 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 NFE2L2Q16236 605 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 CSPP1Q1MSJ5 1256 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 MFSD14BQ5SR56 506 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 C6orf132Q5T0Z8 1188 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 AKNAD1Q5T1N1 836 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 GPAT2Q6NUI2 795 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 POTEEQ6S8J3 1075 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 PADI6Q6TGC4 694 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 TRMT44Q8IYL2 757 aaKnown RBP4.94□□□□□ -1.62
RNF4-211ENST00000509206 MICALL1Q8N3F8 863 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 CCDC191Q8NCU4 936 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 BADQ92934 168 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 TIFAQ96CG3 184 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 PHOX2BQ99453 314 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 TMUB1Q9BVT8 246 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 GREM2Q9H772 168 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 PNMA3Q9UL41 463 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 ZHX2Q9Y6X8 837 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 ZSWIM8A7E2V4 1837 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 PRUNE2Q8WUY3 3088 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 NCOR1O75376 2440 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 AOX1Q06278 1338 aa4.94□□□□□ -1.62
RNF4-211ENST00000509206 CACNA1AO00555 2505 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 PLIN1O60240 522 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 GPR37L1O60883 481 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 TAF5LO75529 589 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 DDX58O95786 925 aaKnown RBP4.93□□□□□ -1.62
RNF4-211ENST00000509206 OATP04181 439 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 COL6A1P12109 1028 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 IL1R1P14778 569 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 ZKSCAN1P17029 563 aaPredicted RBP4.93□□□□□ -1.62
RNF4-211ENST00000509206 DNAJB2P25686 324 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 CNGA1P29973 690 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 CACNB3P54284 484 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 LSM11P83369 360 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNF4-211ENST00000509206 FOXK2Q01167 660 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 CHRNDQ07001 517 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 PABPC4Q13310 644 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNF4-211ENST00000509206 METTL3Q86U44 580 aaKnown RBP4.93□□□□□ -1.62
RNF4-211ENST00000509206 VPS37DQ86XT2 251 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 TTLL11Q8NHH1 800 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 TEKT1Q969V4 418 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 ZMYND15Q9H091 742 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 PRDM12Q9H4Q4 367 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 BABAM1Q9NWV8 329 aa4.93□□□□□ -1.62
RNF4-211ENST00000509206 FAM86C2PA6NEL3 165 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 BMP1P13497 986 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 ITGA6P23229 1130 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 PTPREP23469 700 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 SSTR3P32745 418 aaPredicted RBP4.92□□□□□ -1.62
RNF4-211ENST00000509206 GCLCP48506 637 aaPredicted RBP4.92□□□□□ -1.62
RNF4-211ENST00000509206 PSEN2P49810 448 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 RIPK4P57078 832 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 LMOD3Q0VAK6 560 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 NEXNQ0ZGT2 675 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 FAM110CQ1W6H9 321 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 TAF7LQ5H9L4 462 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 FAM83AQ86UY5 434 aa4.92□□□□□ -1.62
RNF4-211ENST00000509206 PCMTD1Q96MG8 357 aaPredicted RBP4.92□□□□□ -1.62
RNF4-211ENST00000509206 ADAM33Q9BZ11 813 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms