RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 ZNF70Q9UC06 446 aaPredicted RBP12.29□□□□□ -0.44
RFC1-211ENST00000509084 WDR19Q8NEZ3 1342 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 ATRNL1Q5VV63 1379 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 IQCA1LA6NCM1 817 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 NEK4P51957 841 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 BECN1Q14457 450 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 ADCK5Q3MIX3 580 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 APOBEC3FQ8IUX4 373 aaKnown RBP12.28□□□□□ -0.44
RFC1-211ENST00000509084 TBC1D10CQ8IV04 446 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 SNX21Q969T3 373 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 EHD4Q9H223 541 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 DDX4Q9NQI0 724 aaKnown RBP12.28□□□□□ -0.44
RFC1-211ENST00000509084 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
RFC1-211ENST00000509084 SCN4AP35499 1836 aa12.27□□□□□ -0.44
RFC1-211ENST00000509084 ORC4O43929 436 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 FGRP09769 529 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 RPS6KB1P23443 525 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 MCM5P33992 734 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
RFC1-211ENST00000509084 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 NFIAQ12857 509 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 STOX1Q6ZVD7 989 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 DHX32Q7L7V1 743 aaKnown RBP12.27□□□□□ -0.45
RFC1-211ENST00000509084 HSCBQ8IWL3 235 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 FAM151AQ8WW52 585 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 ESR2Q92731 530 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 NBPF3Q9H094 633 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 SWAP70Q9UH65 585 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 SAP30BPQ9UHR5 308 aaKnown RBP12.27□□□□□ -0.45
RFC1-211ENST00000509084 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.45
RFC1-211ENST00000509084 SHTN1A0MZ66 631 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 CLRN2A0PK11 232 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 CACNB3P54284 484 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 RBM26Q5T8P6 1007 aaKnown RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 C16orf86Q6ZW13 317 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 ZSCAN29Q8IWY8 852 aaPredicted RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 MB21D2Q8IYB1 491 aaPredicted RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 ALDH8A1Q9H2A2 487 aaPredicted RBP12.26□□□□□ -0.45
RFC1-211ENST00000509084 TOMM22Q9NS69 142 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 PI4KBQ9UBF8 816 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 SERPINB13Q9UIV8 391 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
RFC1-211ENST00000509084 TAF6LQ9Y6J9 622 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 NEDD4P46934 1319 aa12.26□□□□□ -0.45
RFC1-211ENST00000509084 CYP2D7A0A087X1C5 515 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 CYP2D6P10635 497 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 EPS15P42566 896 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 FGD1P98174 961 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 TCP10Q12799 353 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
RFC1-211ENST00000509084 FBXL16Q8N461 479 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
RFC1-211ENST00000509084 HOOK2Q96ED9 719 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 TMEM87BQ96K49 555 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 TTC14Q96N46 770 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 MKNK2Q9HBH9 465 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 PPP2R3BQ9Y5P8 575 aa12.25□□□□□ -0.45
RFC1-211ENST00000509084 B4E1Z4 1266 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 PRC1O43663 620 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 EGFRP00533 1210 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 PLCD1P51178 756 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 RRP12Q5JTH9 1297 aaKnown RBP12.24□□□□□ -0.45
RFC1-211ENST00000509084 IQCA1Q86XH1 822 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
RFC1-211ENST00000509084 TRPM4Q8TD43 1214 aa12.24□□□□□ -0.45
RFC1-211ENST00000509084 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
RFC1-211ENST00000509084 ERICH2A1L162 156 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 TSPY2A6NKD2 308 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 KDM4AO75164 1064 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 EPHX2P34913 555 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
RFC1-211ENST00000509084 GABPAQ06546 454 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 PNMA8AQ86V59 439 aaPredicted RBP12.23□□□□□ -0.45
RFC1-211ENST00000509084 METTL16Q86W50 562 aaKnown RBP12.23□□□□□ -0.45
RFC1-211ENST00000509084 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
RFC1-211ENST00000509084 CSRNP1Q96S65 589 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 GGA3Q9NZ52 723 aa12.23□□□□□ -0.45
RFC1-211ENST00000509084 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
RFC1-211ENST00000509084 PLIN4Q96Q06 1357 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 MYH8P13535 1937 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms