RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 GSC2O15499 205 aa11.87□□□□□ -0.51
CHD1-205ENST00000508756 CILPO75339 1184 aa11.87□□□□□ -0.51
CHD1-205ENST00000508756 HDLBPQ00341 1268 aaKnown RBP11.87□□□□□ -0.51
CHD1-205ENST00000508756 FBXO27Q8NI29 283 aa11.87□□□□□ -0.51
CHD1-205ENST00000508756 PCOLCE2Q9UKZ9 415 aa11.87□□□□□ -0.51
CHD1-205ENST00000508756 CDK5R2Q13319 367 aa11.86□□□□□ -0.51
CHD1-205ENST00000508756 C9orf131Q5VYM1 1079 aa11.86□□□□□ -0.51
CHD1-205ENST00000508756 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
CHD1-205ENST00000508756 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
CHD1-205ENST00000508756 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD1-205ENST00000508756 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
CHD1-205ENST00000508756 LOC100996750A0A140TA64 210 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 BPNT1O95861 308 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 SHKBP1Q8TBC3 707 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 ZNF296Q8WUU4 475 aaPredicted RBP11.85□□□□□ -0.51
CHD1-205ENST00000508756 GATA6Q92908 595 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 KRTAP4-6Q9BYQ5 205 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 KCNQ5Q9NR82 932 aa11.85□□□□□ -0.51
CHD1-205ENST00000508756 TLR3O15455 904 aaKnown RBP11.84□□□□□ -0.51
CHD1-205ENST00000508756 F13BP05160 661 aa11.84□□□□□ -0.51
CHD1-205ENST00000508756 GRK4P32298 578 aa11.84□□□□□ -0.51
CHD1-205ENST00000508756 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
CHD1-205ENST00000508756 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
CHD1-205ENST00000508756 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
CHD1-205ENST00000508756 FBRSQ9HAH7 460 aa11.84□□□□□ -0.51
CHD1-205ENST00000508756 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
CHD1-205ENST00000508756 WDR64B1ANS9 1081 aa11.83□□□□□ -0.52
CHD1-205ENST00000508756 ZDHHC13Q8IUH4 622 aa11.83□□□□□ -0.52
CHD1-205ENST00000508756 FAM170BA6NMN3 283 aa11.82□□□□□ -0.52
CHD1-205ENST00000508756 GREM1O60565 184 aa11.82□□□□□ -0.52
CHD1-205ENST00000508756 RACK1P63244 317 aaKnown RBP11.82□□□□□ -0.52
CHD1-205ENST00000508756 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
CHD1-205ENST00000508756 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
CHD1-205ENST00000508756 ZNF507Q8TCN5 953 aa11.82□□□□□ -0.52
CHD1-205ENST00000508756 CORINQ9Y5Q5 1042 aa11.82□□□□□ -0.52
CHD1-205ENST00000508756 CRKP46108 304 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 MPP2Q14168 576 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 NKG7Q16617 165 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 SLC51AQ86UW1 340 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
CHD1-205ENST00000508756 DDX41Q9UJV9 622 aaKnown RBP11.81□□□□□ -0.52
CHD1-205ENST00000508756 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
CHD1-205ENST00000508756 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
CHD1-205ENST00000508756 SPON2Q9BUD6 331 aa11.8□□□□□ -0.52
CHD1-205ENST00000508756 POLR3KQ9Y2Y1 108 aaPredicted RBP11.8□□□□□ -0.52
CHD1-205ENST00000508756 TACC3Q9Y6A5 838 aa11.8□□□□□ -0.52
CHD1-205ENST00000508756 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
CHD1-205ENST00000508756 TGFB1P01137 390 aa11.79□□□□□ -0.52
CHD1-205ENST00000508756 PGRP06401 933 aa11.79□□□□□ -0.52
CHD1-205ENST00000508756 REC114Q7Z4M0 266 aa11.79□□□□□ -0.52
CHD1-205ENST00000508756 KCT2Q8NC54 265 aa11.79□□□□□ -0.52
CHD1-205ENST00000508756 FAM87AP0C7U9 286 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 SLBPQ14493 270 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD1-205ENST00000508756 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 ARMCX6Q7L4S7 300 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 OSBPL1AQ9BXW6 950 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
CHD1-205ENST00000508756 PRR19A6NJB7 356 aa11.77□□□□□ -0.53
CHD1-205ENST00000508756 LEFTY1O75610 366 aa11.77□□□□□ -0.53
CHD1-205ENST00000508756 HID1Q8IV36 788 aa11.77□□□□□ -0.53
CHD1-205ENST00000508756 TOP6BLQ8N6T0 577 aa11.77□□□□□ -0.53
CHD1-205ENST00000508756 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.53
CHD1-205ENST00000508756 PDE4BQ07343 736 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 APOBRQ0VD83 1088 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
CHD1-205ENST00000508756 GIMAP7Q8NHV1 300 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 DUSP23Q9BVJ7 150 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
CHD1-205ENST00000508756 TCF3P15923 654 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 PLCG1P19174 1290 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 SEZ6Q53EL9 994 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 OGFOD3Q6PK18 319 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 ZNF654Q8IZM8 581 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 DPH2Q9BQC3 489 aaPredicted RBP11.75□□□□□ -0.53
CHD1-205ENST00000508756 RNF112Q9ULX5 631 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
CHD1-205ENST00000508756 ACSF2Q96CM8 615 aaPredicted RBP11.74□□□□□ -0.53
CHD1-205ENST00000508756 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
CHD1-205ENST00000508756 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.74□□□□□ -0.53
CHD1-205ENST00000508756 E9PSI1 815 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 LRIG2O94898 1065 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 HTR3BO95264 441 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 PRAMEF13Q5VWM6 474 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 TMEM87BQ96K49 555 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
CHD1-205ENST00000508756 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 PIM2Q9P1W9 311 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 ADAM30Q9UKF2 790 aa11.73□□□□□ -0.53
CHD1-205ENST00000508756 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 CAP2P40123 477 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 CYP27A1Q02318 531 aa11.72□□□□□ -0.53
CHD1-205ENST00000508756 MRPL41Q8IXM3 137 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms