RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 GPSM2P81274 684 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 CERS3Q8IU89 383 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 A0A1W2PQ27 194 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 A0A1W2PQ64 194 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 A0A1W2PQD8 194 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 ZBTB43O43298 467 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 YEATS4O95619 227 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 IL1R1P14778 569 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 PTGER2P43116 358 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 GSTO1P78417 241 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 FSIP1Q8NA03 581 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 ESR2Q92731 530 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 ERICH2A1L162 156 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 GOLGA6L19H0YKK7 550 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 CHAF1AQ13111 956 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 STK38Q15208 465 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 DNTTIP2Q5QJE6 756 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 TTC12Q9H892 705 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 SLC12A7Q9Y666 1083 aa13.4□□□□□ -0.26
PRPF40B-203ENST00000508736 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 AP5Z1O43299 807 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 UFL1O94874 794 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 SYNE3Q6ZMZ3 975 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 FTOQ9C0B1 505 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 DNAJC25Q9H1X3 360 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 CD209Q9NNX6 404 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 STK36Q9NRP7 1315 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
PRPF40B-203ENST00000508736 PDE6BP35913 854 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 PPP4CP60510 307 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 WTAPQ15007 396 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 NTRK3Q16288 839 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 ZNF830Q96NB3 372 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 NAT10Q9H0A0 1025 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 INCENPQ9NQS7 918 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 SPTLC3Q9NUV7 552 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 ANO10Q9NW15 660 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 AATFQ9NY61 560 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 RRP9O43818 475 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 ORC4O43929 436 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 LDHCP07864 332 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 NPR1P16066 1061 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 MYSM1Q5VVJ2 828 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 DRC7Q8IY82 874 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 ENGASEQ8NFI3 743 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
PRPF40B-203ENST00000508736 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 LAMB1P07942 1786 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 PPEF1O14829 653 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 SRGNP10124 158 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 CDC27P30260 824 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 CDC25BP30305 580 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 ALDH1B1P30837 517 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 ZNF75DP51815 510 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 SEC23AQ15436 765 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 ZRSR1Q15695 479 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 CEP57L1Q8IYX8 460 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 MPNDQ8N594 471 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
PRPF40B-203ENST00000508736 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 450.2 ms