RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 FAM151AQ8WW52 585 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 KCNB2Q92953 911 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 DDRGK1Q96HY6 314 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 OSBPL5Q9H0X9 879 aaPredicted RBP10.33□□□□□ -0.76
USP46-207ENST00000508499 EHD4Q9H223 541 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 TDRD3Q9H7E2 651 aaKnown RBP10.33□□□□□ -0.76
USP46-207ENST00000508499 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.76
USP46-207ENST00000508499 FAM198AQ9UFP1 575 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 CTNNA3Q9UI47 895 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 SLC4A4Q9Y6R1 1079 aa10.33□□□□□ -0.76
USP46-207ENST00000508499 GREB1LQ9C091 1923 aaPredicted RBP10.32□□□□□ -0.76
USP46-207ENST00000508499 CNTNAP1P78357 1384 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 FGAP02671 866 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 FGRP09769 529 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 TNNI2P48788 182 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 TBC1D10BQ4KMP7 808 aaPredicted RBP10.32□□□□□ -0.76
USP46-207ENST00000508499 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 EPB41L4AQ9HCS5 686 aaPredicted RBP10.32□□□□□ -0.76
USP46-207ENST00000508499 PCDHAC2Q9Y5I4 1007 aa10.32□□□□□ -0.76
USP46-207ENST00000508499 VPS53Q5VIR6 699 aa10.31□□□□□ -0.76
USP46-207ENST00000508499 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
USP46-207ENST00000508499 TGFBRAP1Q8WUH2 860 aa10.31□□□□□ -0.76
USP46-207ENST00000508499 SDR42E1Q8WUS8 393 aa10.31□□□□□ -0.76
USP46-207ENST00000508499 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
USP46-207ENST00000508499 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
USP46-207ENST00000508499 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 PRKAB2O43741 272 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 TBC1D12O60347 775 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 HSPA4P34932 840 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 USP5P45974 858 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 ANAPC15P60006 121 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 PTH1RQ03431 593 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 NFIAQ12857 509 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 C12orf60Q5U649 245 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 CTR9Q6PD62 1173 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 TTC6Q86TZ1 520 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 TEPSINQ96N21 525 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 NAPBQ9H115 298 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 ANO2Q9NQ90 1003 aa10.3□□□□□ -0.76
USP46-207ENST00000508499 RBM25P49756 843 aaKnown RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 IRX5P78411 483 aaPredicted RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 GABPAQ06546 454 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 ANGEL2Q5VTE6 544 aaKnown RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 RNF20Q5VTR2 975 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 FOXP4Q8IVH2 680 aaPredicted RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 DEFB129Q9H1M3 183 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 RRAGCQ9HB90 399 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 GGA3Q9NZ52 723 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 PI4KBQ9UBF8 816 aa10.29□□□□□ -0.76
USP46-207ENST00000508499 HERC5Q9UII4 1024 aaKnown RBP10.29□□□□□ -0.76
USP46-207ENST00000508499 DOCK1Q14185 1865 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 OTOFQ9HC10 1997 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 CLRN2A0PK11 232 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 UNCXA6NJT0 531 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 USP17L21D6R901 530 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 TDO2P48775 406 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 RASA3Q14644 834 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
USP46-207ENST00000508499 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
USP46-207ENST00000508499 CDC37L1Q7L3B6 337 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 NMRK2Q9NPI5 230 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
USP46-207ENST00000508499 RBM8AQ9Y5S9 174 aaKnown RBP10.28□□□□□ -0.76
USP46-207ENST00000508499 ZNF213O14771 459 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 APPP05067 770 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 HLA-DOAP06340 250 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 CYP21A2P08686 494 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 PPARAQ07869 468 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 GSE1Q14687 1217 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 TATDN1Q6P1N9 297 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 C16orf86Q6ZW13 317 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 MAPKAPK5Q8IW41 473 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 STAG1Q8WVM7 1258 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
USP46-207ENST00000508499 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 ZNF287Q9HBT7 754 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
USP46-207ENST00000508499 GINM1Q9NU53 330 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 SERPINB13Q9UIV8 391 aa10.27□□□□□ -0.77
USP46-207ENST00000508499 ASTN2O75129 1339 aaPredicted RBP10.27□□□□□ -0.77
USP46-207ENST00000508499 SSC5DA1L4H1 1573 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 PLIN4Q96Q06 1357 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 DDTLA6NHG4 134 aaPredicted RBP10.26□□□□□ -0.77
USP46-207ENST00000508499 TCP10L2B9ZVM9 353 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 KIF3CO14782 793 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 SLC27A2O14975 620 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 ORC4O43929 436 aa10.26□□□□□ -0.77
USP46-207ENST00000508499 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
USP46-207ENST00000508499 ZKSCAN1P17029 563 aaPredicted RBP10.26□□□□□ -0.77
USP46-207ENST00000508499 MCCP23508 829 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms