RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 RPSAP08865 295 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 GUCY2CP25092 1073 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CFAP157Q5JU67 520 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 ANKRD20A3Q5VUR7 823 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 KSR2Q6VAB6 950 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 PAF1Q8N7H5 531 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 BICD1Q96G01 975 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 SH3GL3Q99963 347 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 IFIH1Q9BYX4 1025 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 ABCC2Q92887 1545 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CEP104O60308 925 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 RPL13P26373 211 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 STX2P32856 288 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CYP2C19P33261 490 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 RFC1P35251 1148 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CASP8Q14790 479 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 ASIC2Q16515 512 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 KRT79Q5XKE5 535 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 SARM1Q6SZW1 724 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 DZIP1Q86YF9 867 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TRMT2AQ8IZ69 625 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TSPYL6Q8N831 410 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 DDX23Q9BUQ8 820 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CNOT10Q9H9A5 744 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 SCOCQ9UIL1 159 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 FRMD3A2A2Y4 597 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TSPY2A6NKD2 308 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CCDC169A6NNP5 214 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 POLR2DO15514 142 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 DEXIO95424 95 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 GSPT1P15170 499 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CMA1P23946 247 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 DYNC1I2Q13409 638 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 PPP4R3AQ6IN85 833 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 KLHL7Q8IXQ5 586 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 CSGALNACT2Q8N6G5 542 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 HMGXB3Q12766 1538 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 PPFIA2O75334 1257 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 STARD3NLO95772 234 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 ZSCAN20P17040 1043 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TPD52P55327 224 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 RAPGEF1Q13905 1077 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 GDAP1L1Q96MZ0 367 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TSC22D3Q99576 134 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 SEPT2Q15019 361 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 MAIP1Q8WWC4 291 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 DESI2Q9BSY9 194 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TAB2Q9NYJ8 693 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 E2F5Q15329 346 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 ME3Q16798 604 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 CC2D1AQ6P1N0 951 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 ARMC2Q8NEN0 867 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 LINS1Q8NG48 757 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TSPYL2Q9H2G4 693 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 FAF1Q9UNN5 650 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TEX14Q8IWB6 1497 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 NOS1P29475 1434 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 WASLO00401 505 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 ANKRD7Q92527 254 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 NUF2Q9BZD4 464 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 C6orf50Q9HD87 102 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 SNRKQ9NRH2 765 aa8.13□□□□□ -1.11
UBE2D3-224ENST00000508474 TMEM110-MUSTN1A8MSY1 372 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 CREB3O43889 395 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 OPHN1O60890 802 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 DNAJC8O75937 253 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 PFKFB1P16118 471 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 KMT5BQ4FZB7 885 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SV2BQ7L1I2 683 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SRLQ86TD4 932 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 PPP1R9AQ9ULJ8 1098 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 I3L4J1 428 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 ERCC5P28715 1186 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 PPP2R5BQ15173 497 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 MYSM1Q5VVJ2 828 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 FBXO41Q8TF61 875 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 P3H4Q92791 437 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 FAM169AQ9Y6X4 670 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 TXNDC9O14530 226 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SKIP12755 728 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 GUCY2FP51841 1108 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 TAF11Q15544 211 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SLF2Q8IX21 1173 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms