RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 TMEM87BQ96K49 555 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 EPB41L4AQ9HCS5 686 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
HMGCLL1-208ENST00000508459 FGRP09769 529 aa17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 SNX21Q969T3 373 aa17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 TDRD3Q9H7E2 651 aaKnown RBP17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
HMGCLL1-208ENST00000508459 FOXP2O15409 715 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 NEK4P51957 841 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 PICALMQ13492 652 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 DCPSQ96C86 337 aaKnown RBP17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
HMGCLL1-208ENST00000508459 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
HMGCLL1-208ENST00000508459 TBC1D12O60347 775 aa17■□□□□ 0.31
HMGCLL1-208ENST00000508459 DDNO94850 711 aaPredicted RBP17■□□□□ 0.31
HMGCLL1-208ENST00000508459 RPS6KB1P23443 525 aa17■□□□□ 0.31
HMGCLL1-208ENST00000508459 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
HMGCLL1-208ENST00000508459 C16orf86Q6ZW13 317 aa17■□□□□ 0.31
HMGCLL1-208ENST00000508459 WDR90Q96KV7 1748 aa17■□□□□ 0.31
HMGCLL1-208ENST00000508459 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
HMGCLL1-208ENST00000508459 DDX60LQ5H9U9 1706 aaKnown RBP16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 HAND2P61296 217 aa16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 METTL16Q86W50 562 aaKnown RBP16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
HMGCLL1-208ENST00000508459 EPHX2P34913 555 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 NF2P35240 595 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 RCAN1P53805 252 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 SYNE3Q6ZMZ3 975 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
HMGCLL1-208ENST00000508459 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 DHX16O60231 1041 aaKnown RBP16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 TTC14Q96N46 770 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 TCP11L1Q9NUJ3 509 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
HMGCLL1-208ENST00000508459 CLRN2A0PK11 232 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 RANBP6O60518 1105 aaKnown RBP16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 LIFRP42702 1097 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 TCP10Q12799 353 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 KIF2CQ99661 725 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 SYNPO2Q9UMS6 1093 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
HMGCLL1-208ENST00000508459 MYH8P13535 1937 aa16.96■□□□□ 0.3
HMGCLL1-208ENST00000508459 CALM1P0DP23 149 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 CALM2P0DP24 149 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 CALM3P0DP25 149 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 EPS15P42566 896 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 CDK8P49336 464 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 NFIAQ12857 509 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 RASA3Q14644 834 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 RRP12Q5JTH9 1297 aaKnown RBP16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 MB21D2Q8IYB1 491 aaPredicted RBP16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 DEFB129Q9H1M3 183 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 CABP5Q9NP86 173 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
HMGCLL1-208ENST00000508459 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 PLIN4Q96Q06 1357 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 CCDC196A0A1B0GTZ2 297 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 PRC1O43663 620 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 KDM4AO75164 1064 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 GABPAQ06546 454 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 DGKHQ86XP1 1220 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 AGXT2Q9BYV1 514 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 TAF1DQ9H5J8 278 aaPredicted RBP16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms