RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 SUPT16HQ9Y5B9 1047 aaKnown RBP2.79□□□□□ -1.96
SMN2-208ENST00000508258 ROBO2Q9HCK4 1378 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 FAM221AA4D161 298 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 KLF4O43474 513 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 MED26O95402 600 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 B3GALT4O96024 378 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 HMGB1P09429 215 aaKnown RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 ADH5P11766 374 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 BMP6P22004 513 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 ETFBP38117 255 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 CRKP46108 304 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 NASPP49321 788 aaPredicted RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 IRAK1P51617 712 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 GP2P55259 537 aaKnown RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 FAM160A1Q05DH4 1040 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 SOX4Q06945 474 aaPredicted RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 ZNF423Q2M1K9 1284 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 RASIP1Q5U651 963 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 PCNX4Q63HM2 1172 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 ZNF746Q6NUN9 644 aaPredicted RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 CDPF1Q6NVV7 123 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 GOLM1Q8NBJ4 401 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 C2CD4AQ8NCU7 369 aaPredicted RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 MKL1Q969V6 931 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 TBC1D32Q96NH3 1257 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 ZC3H12CQ9C0D7 883 aaKnown RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 ZSWIM4Q9H7M6 989 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 ZNF408Q9H9D4 720 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 SUGCTQ9HAC7 445 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 LRRC4CQ9HCJ2 640 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 UBP1Q9NZI7 540 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 PIM2Q9P1W9 311 aa2.78□□□□□ -1.96
SMN2-208ENST00000508258 GPN3Q9UHW5 284 aaPredicted RBP2.78□□□□□ -1.96
SMN2-208ENST00000508258 PRR19A6NJB7 356 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 KIAA1324LA8MWY0 1029 aaPredicted RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 CILPO75339 1184 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 TIAF1O95411 115 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 ECEL1O95672 775 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 WNT11O96014 354 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 SSBP05455 408 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMN2-208ENST00000508258 ASPAP45381 313 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 APOBRQ0VD83 1088 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 MAP7Q14244 749 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 SNAP47Q5SQN1 464 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 EGFLAMQ63HQ2 1017 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 BNC2Q6ZN30 1099 aaPredicted RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 CKAP2LQ8IYA6 745 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 NLGN1Q8N2Q7 840 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 GATAD2BQ8WXI9 593 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 NKD1Q969G9 470 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 SHDQ96IW2 340 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 METTL22Q9BUU2 404 aaPredicted RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 PIDD1Q9HB75 910 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 TMEM39AQ9NV64 488 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 CACNA2D2Q9NY47 1150 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 SIRPGQ9P1W8 387 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 PRKAG3Q9UGI9 489 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 CYP8B1Q9UNU6 501 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 CDK11AQ9UQ88 783 aaPredicted RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 TMA7Q9Y2S6 64 aaKnown RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 DAGLAQ9Y4D2 1042 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 PCDHB5Q9Y5E4 795 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 ACTL7BQ9Y614 415 aa2.77□□□□□ -1.97
SMN2-208ENST00000508258 OAS3Q9Y6K5 1087 aaKnown RBP2.77□□□□□ -1.97
SMN2-208ENST00000508258 FAM170BA6NMN3 283 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 CYP26A1O43174 497 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 AOC2O75106 756 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 F13A1P00488 732 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 F13BP05160 661 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 CTSBP07858 339 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 NFICP08651 508 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 NME2P22392 152 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 HOXA10P31260 410 aaPredicted RBP2.76□□□□□ -1.97
SMN2-208ENST00000508258 HNRNPUQ00839 825 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMN2-208ENST00000508258 PPP2R3AQ06190 1150 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 ZNF252P-AS1Q0IIN9 211 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 AP3B2Q13367 1082 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 RAB33AQ14088 237 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 MPP2Q14168 576 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 BMS1Q14692 1282 aaKnown RBP2.76□□□□□ -1.97
SMN2-208ENST00000508258 NFE2L2Q16236 605 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 DUSP27Q5VZP5 1158 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 SCARA3Q6AZY7 606 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 MCTP1Q6DN14 999 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 SDE2Q6IQ49 451 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 ZNF662Q6ZS27 426 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 ANKS3Q6ZW76 656 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 LRP10Q7Z4F1 713 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 PDZD3Q86UT5 571 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 JAZF1Q86VZ6 243 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 DTX1Q86Y01 620 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 TP53INP2Q8IXH6 220 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 REXO1Q8N1G1 1221 aaKnown RBP2.76□□□□□ -1.97
SMN2-208ENST00000508258 FBXO27Q8NI29 283 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 STK35Q8TDR2 534 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 KCNB2Q92953 911 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 GAL3ST3Q96A11 431 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 SRRTQ9BXP5 876 aaKnown RBP2.76□□□□□ -1.97
SMN2-208ENST00000508258 FAM105AQ9NUU6 356 aa2.76□□□□□ -1.97
SMN2-208ENST00000508258 MRVI1Q9Y6F6 885 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms