RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 TNNQ9UQP3 1299 aa9.85□□□□□ -0.83
UBE2D3-222ENST00000508238 MANSC4A6NHS7 340 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 TCP10L2B9ZVM9 353 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 SMAPO00193 183 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 ALDH1A1P00352 501 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 PHKA1P46020 1223 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 TIMM10P62072 90 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 MDM2Q00987 491 aaPredicted RBP9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 CLMNQ96JQ2 1002 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 SLC4A5Q9BY07 1137 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 TMEM39BQ9GZU3 492 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 FZD1Q9UP38 647 aa9.84□□□□□ -0.83
UBE2D3-222ENST00000508238 PNMA6EA0A0J9YXQ4 647 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 A0A1B0GUL7 405 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 ZBTB7BO15156 539 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 LDHBP07195 334 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 ADORA1P30542 326 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 ATP8B2P98198 1209 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 TFCP2Q12800 502 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 RASGRF1Q13972 1273 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 MVPQ14764 893 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 ZGPATQ8N5A5 531 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 HOOK2Q96ED9 719 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 XAGE2Q96GT9 111 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 WNK4Q96J92 1243 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 REPIN1Q9BWE0 567 aaKnown RBP9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 MCOLN1Q9GZU1 580 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 TMOD2Q9NZR1 351 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 LAMB1P07942 1786 aa9.83□□□□□ -0.84
UBE2D3-222ENST00000508238 RLBP1P12271 317 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 PRDX5P30044 214 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 CLCN1P35523 988 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 G3BP1Q13283 466 aaKnown RBP eCLIP9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 CDC42EP5Q6NZY7 148 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 FAM151AQ8WW52 585 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 GPR108Q9NPR9 543 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 DAGLAQ9Y4D2 1042 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 RPAP1Q9BWH6 1393 aaPredicted RBP9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 MYH2Q9UKX2 1941 aa9.82□□□□□ -0.84
UBE2D3-222ENST00000508238 RCCD1A6NED2 376 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 GPR25O00155 361 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 TBC1D8O95759 1140 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 GJA5P36382 358 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 CACNB3P54284 484 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 DGKZQ13574 1117 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 DIXDC1Q155Q3 683 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 PKN2Q16513 984 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 SPTY2D1Q68D10 685 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 CTU1Q7Z7A3 348 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 FTSJ3Q8IY81 847 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 NOP58Q9Y2X3 529 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 AK9Q5TCS8 1911 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 GAKO14976 1311 aa9.81□□□□□ -0.84
UBE2D3-222ENST00000508238 IGF2BP3O00425 579 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 ARID4AP29374 1257 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 RGS19P49795 217 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 VGLL4Q14135 290 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 DCAF15Q66K64 600 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 OTUD7BQ6GQQ9 843 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 ZNF296Q8WUU4 475 aaPredicted RBP9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 IDI2Q9BXS1 227 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 CSADQ9Y600 493 aa9.8□□□□□ -0.84
UBE2D3-222ENST00000508238 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 GPR75-ASB3A0A0A6YYF3 556 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 IGSF3O75054 1194 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ENTPD3O75355 529 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 MAP4K4O95819 1239 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 UQCRFS1P1P0C7P4 283 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 MS4A1P11836 297 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 NFIAQ12857 509 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ERO1BQ86YB8 467 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ITPRIPQ8IWB1 547 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 SPATA5Q8NB90 893 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 OPTNQ96CV9 577 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ZNF512BQ96KM6 892 aaPredicted RBP9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 NEUROD6Q96NK8 337 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 PTPN18Q99952 460 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 R3HDMLQ9H3Y0 253 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ELP3Q9H9T3 547 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 USP40Q9NVE5 1235 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ABCF2Q9UG63 623 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 ZNF112Q9UJU3 913 aa9.79□□□□□ -0.84
UBE2D3-222ENST00000508238 CCDC85CA6NKD9 419 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 FKTNO75072 461 aa9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 SURF6O75683 361 aaKnown RBP9.78□□□□□ -0.84
UBE2D3-222ENST00000508238 GTF2A2P52657 109 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms