RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 DOCK2Q92608 1830 aa11.5□□□□□ -0.57
CAST-220ENST00000508117 UTYO14607 1347 aa11.5□□□□□ -0.57
CAST-220ENST00000508117 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
CAST-220ENST00000508117 ATRNL1Q5VV63 1379 aa11.5□□□□□ -0.57
CAST-220ENST00000508117 DDX60LQ5H9U9 1706 aaKnown RBP11.49□□□□□ -0.57
CAST-220ENST00000508117 HMGCRP04035 888 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 FGFR2P21802 821 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 MAGEA10P43363 369 aaPredicted RBP11.49□□□□□ -0.57
CAST-220ENST00000508117 TCP10Q12799 353 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 NFIAQ12857 509 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 METTL24Q5JXM2 366 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
CAST-220ENST00000508117 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
CAST-220ENST00000508117 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
CAST-220ENST00000508117 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
CAST-220ENST00000508117 ENTPD3O75355 529 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 LRRC24Q50LG9 513 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 SUCLG2Q96I99 432 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 UBE2OQ9C0C9 1292 aaKnown RBP11.48□□□□□ -0.57
CAST-220ENST00000508117 SRCIN1Q9C0H9 1055 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 C11orf49Q9H6J7 331 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
CAST-220ENST00000508117 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 OGDHLQ9ULD0 1010 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 AGTPBP1Q9UPW5 1226 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
CAST-220ENST00000508117 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
CAST-220ENST00000508117 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
CAST-220ENST00000508117 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
CAST-220ENST00000508117 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
CAST-220ENST00000508117 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
CAST-220ENST00000508117 GADL1Q6ZQY3 521 aa11.47□□□□□ -0.57
CAST-220ENST00000508117 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
CAST-220ENST00000508117 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.57
CAST-220ENST00000508117 NBPF7P0C2Y1 421 aaPredicted RBP11.46□□□□□ -0.57
CAST-220ENST00000508117 MAP3K21Q5TCX8 1036 aa11.46□□□□□ -0.57
CAST-220ENST00000508117 PROCA1Q8NCQ7 364 aaPredicted RBP11.46□□□□□ -0.57
CAST-220ENST00000508117 USP40Q9NVE5 1235 aa11.46□□□□□ -0.57
CAST-220ENST00000508117 GJD2Q9UKL4 321 aa11.46□□□□□ -0.57
CAST-220ENST00000508117 RFX7Q2KHR2 1363 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 PFASO15067 1338 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 PLXNB2O15031 1838 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 COL6A1P12109 1028 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 SYN1P17600 705 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 WDR63Q8IWG1 891 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 LPIN2Q92539 896 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
CAST-220ENST00000508117 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
CAST-220ENST00000508117 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 MYH2Q9UKX2 1941 aa11.45□□□□□ -0.58
CAST-220ENST00000508117 TBC1D12O60347 775 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 LDHBP07195 334 aaKnown RBP11.44□□□□□ -0.58
CAST-220ENST00000508117 XRCC5P13010 732 aaKnown RBP11.44□□□□□ -0.58
CAST-220ENST00000508117 SLC5A1P13866 664 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 PRDX5P30044 214 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
CAST-220ENST00000508117 RGS3P49796 1198 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 EXOSC9Q06265 439 aaKnown RBP11.44□□□□□ -0.58
CAST-220ENST00000508117 GUCD1Q96NT3 240 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 TTC28Q96AY4 2481 aa11.44□□□□□ -0.58
CAST-220ENST00000508117 GAKO14976 1311 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 TRIM75PA6NK02 468 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 SEMA3EO15041 775 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 PABPC4Q13310 644 aaKnown RBP eCLIP11.43□□□□□ -0.58
CAST-220ENST00000508117 TREML2Q5T2D2 321 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 SH3BP5LQ7L8J4 393 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
CAST-220ENST00000508117 TRIB2Q92519 343 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 MORF4L1Q9UBU8 362 aa11.43□□□□□ -0.58
CAST-220ENST00000508117 VCANP13611 3396 aa11.42□□□□□ -0.58
CAST-220ENST00000508117 TRIM32Q13049 653 aa11.42□□□□□ -0.58
CAST-220ENST00000508117 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
CAST-220ENST00000508117 OSBPL5Q9H0X9 879 aaPredicted RBP11.42□□□□□ -0.58
CAST-220ENST00000508117 PRDM6Q9NQX0 595 aa11.42□□□□□ -0.58
CAST-220ENST00000508117 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
CAST-220ENST00000508117 LAMA2P24043 3122 aaKnown RBP11.42□□□□□ -0.58
CAST-220ENST00000508117 DDTLA6NHG4 134 aaPredicted RBP11.41□□□□□ -0.58
CAST-220ENST00000508117 EYA2O00167 538 aa11.41□□□□□ -0.58
CAST-220ENST00000508117 SH3D19Q5HYK7 790 aa11.41□□□□□ -0.58
CAST-220ENST00000508117 ZSCAN29Q8IWY8 852 aaPredicted RBP11.41□□□□□ -0.58
CAST-220ENST00000508117 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
CAST-220ENST00000508117 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
CAST-220ENST00000508117 SNPHO15079 494 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
CAST-220ENST00000508117 ZNF697Q5TEC3 545 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 SLF2Q8IX21 1173 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 KLHDC4Q8TBB5 520 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
CAST-220ENST00000508117 ASCC2Q9H1I8 757 aaPredicted RBP11.4□□□□□ -0.58
CAST-220ENST00000508117 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
CAST-220ENST00000508117 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms