RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 BCL2L12Q9HB09 334 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 DOCK2Q92608 1830 aa25.43■■□□□ 1.66
SPCS3-203ENST00000507678 UBE4AQ14139 1066 aa25.42■■□□□ 1.66
SPCS3-203ENST00000507678 MAP3K14Q99558 947 aa25.42■■□□□ 1.66
SPCS3-203ENST00000507678 U2AF2P26368 475 aaKnown RBP eCLIP25.42■■□□□ 1.662e-6■■■□□ 14.7
SPCS3-203ENST00000507678 SF3B3Q15393 1217 aaKnown RBP25.42■■□□□ 1.66
SPCS3-203ENST00000507678 SAFBQ15424 915 aaKnown RBP eCLIP25.42■■□□□ 1.66
SPCS3-203ENST00000507678 SLC51AQ86UW1 340 aa25.42■■□□□ 1.66
SPCS3-203ENST00000507678 SETDB2Q96T68 719 aa25.42■■□□□ 1.66
SPCS3-203ENST00000507678 ZNF804BA4D1E1 1349 aa25.42■■□□□ 1.66
SPCS3-203ENST00000507678 PNOCQ13519 176 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 NOSTRINQ8IVI9 506 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 FANCBQ8NB91 859 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 CHD4Q14839 1912 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 BCL9LQ86UU0 1499 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 SARM1Q6SZW1 724 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 SMAP1Q8IYB5 467 aaPredicted RBP25.41■■□□□ 1.66
SPCS3-203ENST00000507678 JMYQ8N9B5 988 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 ZNF384Q8TF68 577 aa25.41■■□□□ 1.66
SPCS3-203ENST00000507678 RIOK1Q9BRS2 568 aaKnown RBP25.41■■□□□ 1.66
SPCS3-203ENST00000507678 SMC2O95347 1197 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 ESR2Q92731 530 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 MMP1P03956 469 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 AATFQ9NY61 560 aaKnown RBP eCLIP25.4■■□□□ 1.66
SPCS3-203ENST00000507678 ZPR1O75312 459 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 AMIGO3Q86WK7 504 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 CRACR2BQ8N4Y2 399 aaPredicted RBP25.4■■□□□ 1.66
SPCS3-203ENST00000507678 MYRIPQ8NFW9 859 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 OXER1Q8TDS5 423 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 NLRP3Q96P20 1036 aa25.4■■□□□ 1.66
SPCS3-203ENST00000507678 RPS8P62241 208 aaKnown RBP25.39■■□□□ 1.66
SPCS3-203ENST00000507678 GRIN1Q05586 938 aa25.39■■□□□ 1.66
SPCS3-203ENST00000507678 WASF1Q92558 559 aa25.39■■□□□ 1.66
SPCS3-203ENST00000507678 MRFAP1L1Q96HT8 127 aa25.39■■□□□ 1.65
SPCS3-203ENST00000507678 USP17L12C9JPN9 530 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 USP17L21D6R901 530 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 PPP6R2O75170 966 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 NBPF11Q86T75 865 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 STK36Q9NRP7 1315 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 LMOD1P29536 600 aaPredicted RBP25.38■■□□□ 1.65
SPCS3-203ENST00000507678 PRDX5P30044 214 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 NLRP12P59046 1061 aa25.38■■□□□ 1.65
SPCS3-203ENST00000507678 ENAHQ8N8S7 591 aaPredicted RBP25.38■■□□□ 1.65
SPCS3-203ENST00000507678 DYNC1I1O14576 645 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 TOB1P50616 345 aaPredicted RBP25.37■■□□□ 1.65
SPCS3-203ENST00000507678 LONRF3Q496Y0 759 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 LRRC8AQ8IWT6 810 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 BCL11BQ9C0K0 894 aaPredicted RBP25.37■■□□□ 1.65
SPCS3-203ENST00000507678 VPS54Q9P1Q0 977 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 FOXN1O15353 648 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 DEXIO95424 95 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 CDC25BP30305 580 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 MECOMQ03112 1051 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 IFNKQ9P0W0 207 aa25.37■■□□□ 1.65
SPCS3-203ENST00000507678 CICQ96RK0 1608 aaPredicted RBP25.36■■□□□ 1.65
SPCS3-203ENST00000507678 CCDC196A0A1B0GTZ2 297 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 AKAP17AQ02040 695 aaKnown RBP25.36■■□□□ 1.65
SPCS3-203ENST00000507678 IFIT1BQ5T764 474 aaKnown RBP25.36■■□□□ 1.65
SPCS3-203ENST00000507678 TMTC2Q8N394 836 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 CNNM3Q8NE01 707 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 PRIMPOLQ96LW4 560 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 PCDHB6Q9Y5E3 794 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 ECM29Q5VYK3 1845 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 NMT2O60551 498 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 TXNRD3Q86VQ6 643 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 ZSCAN10Q96SZ4 725 aaPredicted RBP25.36■■□□□ 1.65
SPCS3-203ENST00000507678 CABP5Q9NP86 173 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 KCNH3Q9ULD8 1083 aa25.36■■□□□ 1.65
SPCS3-203ENST00000507678 TPD52L1Q16890 204 aaPredicted RBP25.35■■□□□ 1.65
SPCS3-203ENST00000507678 RESP18Q5W5W9 173 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 PDILTQ8N807 584 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 XPO4Q9C0E2 1151 aaKnown RBP25.35■■□□□ 1.65
SPCS3-203ENST00000507678 BAZ2AQ9UIF9 1905 aaKnown RBP25.35■■□□□ 1.65
SPCS3-203ENST00000507678 FAM205CA6NFA0 338 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 PLEKHA8P1O95397 391 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 SEC23AQ15436 765 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 FAM47AQ5JRC9 791 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 KRI1Q8N9T8 703 aaKnown RBP25.35■■□□□ 1.65
SPCS3-203ENST00000507678 CCNL1Q9UK58 526 aaPredicted RBP25.35■■□□□ 1.65
SPCS3-203ENST00000507678 HPSEQ9Y251 543 aa25.35■■□□□ 1.65
SPCS3-203ENST00000507678 HIBADHP31937 336 aaKnown RBP25.34■■□□□ 1.65
SPCS3-203ENST00000507678 CTR9Q6PD62 1173 aa25.34■■□□□ 1.65
SPCS3-203ENST00000507678 SKILP12757 684 aa25.34■■□□□ 1.65
SPCS3-203ENST00000507678 HSP90AA4PQ58FG1 418 aa25.34■■□□□ 1.65
SPCS3-203ENST00000507678 NSUN4Q96CB9 384 aaKnown RBP25.34■■□□□ 1.65
SPCS3-203ENST00000507678 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
SPCS3-203ENST00000507678 RREB1Q92766 1687 aa25.34■■□□□ 1.65
SPCS3-203ENST00000507678 CUTAO60888 179 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 CYP2D6P10635 497 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 ZNF592Q92610 1267 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 TIAM2Q8IVF5 1701 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 TOM1O60784 492 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 ATP1A3P13637 1013 aa25.33■■□□□ 1.65
SPCS3-203ENST00000507678 RBM6P78332 1123 aaKnown RBP25.33■■□□□ 1.65
SPCS3-203ENST00000507678 TRMT1Q9NXH9 659 aaKnown RBP25.33■■□□□ 1.65
SPCS3-203ENST00000507678 V9GY48 417 aaPredicted RBP25.33■■□□□ 1.65
SPCS3-203ENST00000507678 BCORQ6W2J9 1755 aa25.33■■□□□ 1.64
SPCS3-203ENST00000507678 RIOK3O14730 519 aaKnown RBP25.32■■□□□ 1.64
SPCS3-203ENST00000507678 PTPN21Q16825 1174 aa25.32■■□□□ 1.64
SPCS3-203ENST00000507678 TMC6Q7Z403 805 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms