RNA–Protein interactions for RNA: ENST00000507436.1

AP3S1-205, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-205ENST00000507436 ORC1Q13415 861 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 SPRED3Q2MJR0 410 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 TCERG1LQ5VWI1 586 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 USPL1Q5W0Q7 1092 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 DMRTB1Q96MA1 342 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 TCF12Q99081 682 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 CORO1BQ9BR76 489 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 NIF3L1Q9GZT8 377 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 EHD4Q9H223 541 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 PIDD1Q9HB75 910 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 BIN2Q9UBW5 565 aaPredicted RBP4.46□□□□□ -1.7
AP3S1-205ENST00000507436 ADAMTS20P59510 1910 aa4.46□□□□□ -1.7
AP3S1-205ENST00000507436 SOWAHDA6NJG2 315 aa4.45□□□□□ -1.7
AP3S1-205ENST00000507436 BRD1O95696 1058 aa4.45□□□□□ -1.7
AP3S1-205ENST00000507436 GRIA4P48058 902 aa4.45□□□□□ -1.7
AP3S1-205ENST00000507436 NPHS2Q9NP85 383 aa4.45□□□□□ -1.7
AP3S1-205ENST00000507436 EIF1AYO14602 144 aaKnown RBP4.44□□□□□ -1.7
AP3S1-205ENST00000507436 AKAP8O43823 692 aaKnown RBP4.44□□□□□ -1.7
AP3S1-205ENST00000507436 AOC2O75106 756 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 GADD45BO75293 160 aaPredicted RBP4.44□□□□□ -1.7
AP3S1-205ENST00000507436 SASH1O94885 1247 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 GDNFP39905 211 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 ZNF423Q2M1K9 1284 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 CCDC74AQ96AQ1 378 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 DUSP23Q9BVJ7 150 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 RBCK1Q9BYM8 510 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 PPP4R2Q9NY27 417 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 TRAK1Q9UPV9 953 aa4.44□□□□□ -1.7
AP3S1-205ENST00000507436 GNEQ9Y223 722 aaKnown RBP4.44□□□□□ -1.7
AP3S1-205ENST00000507436 GPR182O15218 404 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 TRIM13O60858 407 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 ITPKAP23677 461 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 HNRNPUQ00839 825 aaKnown RBP eCLIP4.43□□□□□ -1.7
AP3S1-205ENST00000507436 PTPN12Q05209 780 aaKnown RBP4.43□□□□□ -1.7
AP3S1-205ENST00000507436 SPATS1Q496A3 300 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 BAHD1Q8TBE0 780 aaPredicted RBP4.43□□□□□ -1.7
AP3S1-205ENST00000507436 ALKBH8Q96BT7 664 aaKnown RBP4.43□□□□□ -1.7
AP3S1-205ENST00000507436 ATXN3LQ9H3M9 355 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 ZNF576Q9H609 170 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 CARS2Q9HA77 564 aaKnown RBP4.43□□□□□ -1.7
AP3S1-205ENST00000507436 NLRP2Q9NX02 1062 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 DCTN4Q9UJW0 460 aa4.43□□□□□ -1.7
AP3S1-205ENST00000507436 TMEM238LA0A1B0GVL6 79 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 B3GALT4O96024 378 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 SRFP11831 508 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 PDE3AQ14432 1141 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 RPS26P11Q5JNZ5 115 aaPredicted RBP4.42□□□□□ -1.7
AP3S1-205ENST00000507436 PRPF40BQ6NWY9 871 aaKnown RBP4.42□□□□□ -1.7
AP3S1-205ENST00000507436 ABHD4Q8TB40 342 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 WDR18Q9BV38 432 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 XYLT2Q9H1B5 865 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 C19orf73Q9NVV2 129 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 PPP1R9AQ9ULJ8 1098 aa4.42□□□□□ -1.7
AP3S1-205ENST00000507436 CNOT6Q9ULM6 557 aaKnown RBP4.42□□□□□ -1.7
AP3S1-205ENST00000507436 OTOL1A6NHN0 477 aaPredicted RBP4.41□□□□□ -1.7
AP3S1-205ENST00000507436 RNGTTO60942 597 aaKnown RBP4.41□□□□□ -1.7
AP3S1-205ENST00000507436 SLFN14P0C7P3 912 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 PLCB3Q01970 1234 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 ZNF385BQ569K4 471 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 TMC7Q7Z402 723 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 SMYD4Q8IYR2 804 aaPredicted RBP4.41□□□□□ -1.7
AP3S1-205ENST00000507436 TOP6BLQ8N6T0 577 aa4.41□□□□□ -1.7
AP3S1-205ENST00000507436 TMPRSS2O15393 492 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 ECEL1O95672 775 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 RAC2P15153 192 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 MAPK1P28482 360 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 TMEM151BQ8IW70 566 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 SPACA3Q8IXA5 215 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 EPS8L3Q8TE67 593 aaKnown RBP4.4□□□□□ -1.71
AP3S1-205ENST00000507436 CCDC120Q96HB5 630 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 GPR20Q99678 358 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 TRIM56Q9BRZ2 755 aaKnown RBP4.4□□□□□ -1.71
AP3S1-205ENST00000507436 ABCB6Q9NP58 842 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 GTF2IRD1Q9UHL9 959 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 MYRFQ9Y2G1 1151 aa4.4□□□□□ -1.71
AP3S1-205ENST00000507436 PNMA6FA0A0J9YX94 578 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 RFXAPO00287 272 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 XRCC5P13010 732 aaKnown RBP4.39□□□□□ -1.71
AP3S1-205ENST00000507436 FCGRTP55899 365 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 DLG4P78352 724 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 ID3Q02535 119 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 PPP2R3AQ06190 1150 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 GRM2Q14416 872 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 DTHD1Q6ZMT9 781 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 HEXIM2Q96MH2 286 aaKnown RBP4.39□□□□□ -1.71
AP3S1-205ENST00000507436 FANCD2OSQ96PS1 177 aa4.39□□□□□ -1.71
AP3S1-205ENST00000507436 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
AP3S1-205ENST00000507436 ZNF157P51786 506 aaPredicted RBP4.38□□□□□ -1.71
AP3S1-205ENST00000507436 CLCN7P51798 805 aa4.38□□□□□ -1.71
AP3S1-205ENST00000507436 KCNA1Q09470 495 aa4.38□□□□□ -1.71
AP3S1-205ENST00000507436 ZSCAN29Q8IWY8 852 aaPredicted RBP4.38□□□□□ -1.71
AP3S1-205ENST00000507436 SSU72Q9NP77 194 aaKnown RBP4.38□□□□□ -1.71
AP3S1-205ENST00000507436 SRRDQ9UH36 339 aa4.38□□□□□ -1.71
AP3S1-205ENST00000507436 GPN3Q9UHW5 284 aaPredicted RBP4.38□□□□□ -1.71
AP3S1-205ENST00000507436 IVNS1ABPQ9Y6Y0 642 aa4.38□□□□□ -1.71
AP3S1-205ENST00000507436 GNAT3A8MTJ3 354 aa4.37□□□□□ -1.71
AP3S1-205ENST00000507436 PATL2C9JE40 543 aaKnown RBP4.37□□□□□ -1.71
AP3S1-205ENST00000507436 TREHO43280 583 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms