RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
CLDND1-214ENST00000507411 DZIP1LQ8IYY4 767 aaKnown RBP9.95□□□□□ -0.82
CLDND1-214ENST00000507411 TRIM43Q96BQ3 446 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-214ENST00000507411 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
CLDND1-214ENST00000507411 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-214ENST00000507411 RPAP1Q9BWH6 1393 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-214ENST00000507411 RGS20O76081 388 aa9.94□□□□□ -0.82
CLDND1-214ENST00000507411 KCNJ4P48050 445 aa9.94□□□□□ -0.82
CLDND1-214ENST00000507411 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
CLDND1-214ENST00000507411 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
CLDND1-214ENST00000507411 PLBD2Q8NHP8 589 aa9.94□□□□□ -0.82
CLDND1-214ENST00000507411 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
CLDND1-214ENST00000507411 FRMPD3Q5JV73 1810 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 SPEF2Q9C093 1822 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 TPRP12270 2363 aaKnown RBP9.93□□□□□ -0.82
CLDND1-214ENST00000507411 A0A0G2JLL6 359 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-214ENST00000507411 GRXCR1A8MXD5 290 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 DNM1LO00429 736 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 PDE8AO60658 829 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 FPGSQ05932 587 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 MIGA2Q7L4E1 593 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 PRRT2Q7Z6L0 340 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-214ENST00000507411 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 MSRAQ9UJ68 235 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 JAG2Q9Y219 1238 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 TRANK1O15050 2925 aa9.93□□□□□ -0.82
CLDND1-214ENST00000507411 CHD6Q8TD26 2715 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 XRCC5P13010 732 aaKnown RBP9.92□□□□□ -0.82
CLDND1-214ENST00000507411 PTPN5P54829 565 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 EMP3P54852 163 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
CLDND1-214ENST00000507411 RAB30Q15771 203 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 SLC28A3Q9HAS3 691 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 TTF2Q9UNY4 1162 aaKnown RBP9.92□□□□□ -0.82
CLDND1-214ENST00000507411 PRRC2BQ5JSZ5 2229 aaKnown RBP9.92□□□□□ -0.82
CLDND1-214ENST00000507411 RLFQ13129 1914 aa9.92□□□□□ -0.82
CLDND1-214ENST00000507411 PLXNB2O15031 1838 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 MYBBP1AQ9BQG0 1328 aaKnown RBP9.91□□□□□ -0.82
CLDND1-214ENST00000507411 RAG1P15918 1043 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 CACNB3P54284 484 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 NOL9Q5SY16 702 aaKnown RBP9.91□□□□□ -0.82
CLDND1-214ENST00000507411 GJD3Q8N144 294 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 SOCS4Q8WXH5 440 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 HLA-CQ95604 372 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 ANKRD2Q9GZV1 360 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 TMOD2Q9NZR1 351 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 TACC3Q9Y6A5 838 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 DCHS1Q96JQ0 3298 aa9.91□□□□□ -0.82
CLDND1-214ENST00000507411 RIF1Q5UIP0 2472 aaKnown RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 SSTR3P32745 418 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 CRKP46108 304 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 GCLCP48506 637 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 KCTD2Q14681 263 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-214ENST00000507411 ZNF804AQ7Z570 1209 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 FAM83AQ86UY5 434 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 LPAR1Q92633 364 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 MFSD14AQ96MC6 490 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 NKX2-4Q9H2Z4 354 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 ZNF112Q9UJU3 913 aa9.9□□□□□ -0.82
CLDND1-214ENST00000507411 ANKRD11Q6UB99 2663 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-214ENST00000507411 KBTBD13C9JR72 458 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 MSCO60682 206 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 IL1R1P14778 569 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 ID4P47928 161 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 TLE2Q04725 743 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 SNX17Q15036 470 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 GJC2Q5T442 439 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-214ENST00000507411 TMEM92Q6UXU6 159 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 HFE2Q6ZVN8 426 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 ANKS1AQ92625 1134 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLDND1-214ENST00000507411 DDX20Q9UHI6 824 aaKnown RBP9.89□□□□□ -0.83
CLDND1-214ENST00000507411 AGTPBP1Q9UPW5 1226 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 DAGLAQ9Y4D2 1042 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 ZHX2Q9Y6X8 837 aa9.89□□□□□ -0.83
CLDND1-214ENST00000507411 DCXO43602 365 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CLTBP09497 229 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CNGA1P29973 690 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 IGHMBP2P38935 993 aaKnown RBP9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CTSWP56202 376 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CCL14Q16627 93 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 MFSD14BQ5SR56 506 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CCDC174Q6PII3 467 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 ARRDC4Q8NCT1 418 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 JARID2Q92833 1246 aaPredicted RBP9.88□□□□□ -0.83
CLDND1-214ENST00000507411 PICK1Q9NRD5 415 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 CACNA1HO95180 2353 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 ZFHX4Q86UP3 3567 aa9.88□□□□□ -0.83
CLDND1-214ENST00000507411 FAM186AA6NE01 2351 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms