RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-204ENST00000507293 PRKCZQ05513 592 aa14.17□□□□□ -0.14
HMGCS1-204ENST00000507293 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
HMGCS1-204ENST00000507293 NAA16Q6N069 864 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-204ENST00000507293 SLC45A1Q9Y2W3 748 aa14.17□□□□□ -0.14
HMGCS1-204ENST00000507293 MYH1P12882 1939 aa14.17□□□□□ -0.14
HMGCS1-204ENST00000507293 GRK4P32298 578 aa14.16□□□□□ -0.14
HMGCS1-204ENST00000507293 MTFR1Q15390 333 aa14.16□□□□□ -0.14
HMGCS1-204ENST00000507293 SMCR8Q8TEV9 937 aaPredicted RBP14.16□□□□□ -0.14
HMGCS1-204ENST00000507293 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
HMGCS1-204ENST00000507293 AATFQ9NY61 560 aaKnown RBP eCLIP14.16□□□□□ -0.141e-6■■■□□ 16.4
HMGCS1-204ENST00000507293 AGTPBP1Q9UPW5 1226 aa14.16□□□□□ -0.14
HMGCS1-204ENST00000507293 DOCK3Q8IZD9 2030 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 ZBTB7BO15156 539 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 BAG3O95817 575 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 CAP2P40123 477 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 TREML2Q5T2D2 321 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 ADGRA1Q86SQ6 560 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 TLR7Q9NYK1 1049 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 GABRQQ9UN88 632 aa14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 NOP58Q9Y2X3 529 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-204ENST00000507293 PLCG2P16885 1265 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 ZAP70P43403 619 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 SPP2Q13103 211 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 MAPKAPK5Q8IW41 473 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 ZNF512BQ96KM6 892 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 PIH1D3Q9NQM4 214 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 HERC5Q9UII4 1024 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 CENPFP49454 3210 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 FLT1P17948 1338 aa14.14□□□□□ -0.15
HMGCS1-204ENST00000507293 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 CCL5P13501 91 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 HMGCS2P54868 508 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 PPP4CP60510 307 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 DIEXFQ68CQ4 756 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 CEP85Q6P2H3 762 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 PROCA1Q8NCQ7 364 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 ZNF280CQ8ND82 737 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 TGFBRAP1Q8WUH2 860 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 EAF2Q96CJ1 260 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 PI4KBQ9UBF8 816 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 BIN2Q9UBW5 565 aaPredicted RBP14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
HMGCS1-204ENST00000507293 NAV1Q8NEY1 1877 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 FLT3LGP49771 235 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 UBXN2AP68543 259 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 AS3MTQ9HBK9 375 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 ZBED9Q6R2W3 1325 aa14.12□□□□□ -0.15
HMGCS1-204ENST00000507293 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 ADCY3O60266 1144 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 CYP7A1P22680 504 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 DYNLL1P63167 89 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 FAM110CQ1W6H9 321 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 DDX60LQ5H9U9 1706 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 HABP4Q5JVS0 413 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 CRACR2BQ8N4Y2 399 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 PANK1Q8TE04 598 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 RNF208Q9H0X6 261 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 DNAJC18Q9H819 358 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 SAP30BPQ9UHR5 308 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
HMGCS1-204ENST00000507293 IGSF3O75054 1194 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 IDH1O75874 414 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 GJB1P08034 283 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 ELNP15502 786 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 GJA8P48165 433 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 JAG1P78504 1218 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 PABPC4Q13310 644 aaKnown RBP eCLIP14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 MTMR2Q13614 643 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 TRIM34Q9BYJ4 488 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 UNC93B1Q9H1C4 597 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
HMGCS1-204ENST00000507293 GDF11O95390 407 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 INHAP05111 366 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 ASNSP08243 561 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 GCLCP48506 637 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 IRF5Q13568 498 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 SHROOM1Q2M3G4 852 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 AACSQ86V21 672 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 METTL16Q86W50 562 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 ERC1Q8IUD2 1116 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 FOXP4Q8IVH2 680 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 COA7Q96BR5 231 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 WDR18Q9BV38 432 aa14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-204ENST00000507293 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms