RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 ARL4DP49703 201 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-202ENST00000507185 BSNDQ8WZ55 320 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 STK26Q9P289 416 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 SOX13Q9UN79 622 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 ROCK1Q13464 1354 aa11.1□□□□□ -0.63
PFDN1-202ENST00000507185 XRN1Q8IZH2 1706 aaKnown RBP11.09□□□□□ -0.63
PFDN1-202ENST00000507185 H3BRB1 525 aa11.09□□□□□ -0.63
PFDN1-202ENST00000507185 SERPINB4P48594 390 aa11.09□□□□□ -0.63
PFDN1-202ENST00000507185 PDE4CQ08493 712 aa11.09□□□□□ -0.63
PFDN1-202ENST00000507185 UBASH3BQ8TF42 649 aa11.09□□□□□ -0.63
PFDN1-202ENST00000507185 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
PFDN1-202ENST00000507185 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
PFDN1-202ENST00000507185 FSTP19883 344 aa11.08□□□□□ -0.64
PFDN1-202ENST00000507185 NLRP12P59046 1061 aa11.08□□□□□ -0.64
PFDN1-202ENST00000507185 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
PFDN1-202ENST00000507185 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
PFDN1-202ENST00000507185 RAXQ9Y2V3 346 aa11.08□□□□□ -0.64
PFDN1-202ENST00000507185 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 DHX15O43143 795 aaKnown RBP11.07□□□□□ -0.64
PFDN1-202ENST00000507185 C19orf57Q0VDD7 668 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 LRP8Q14114 963 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 STOML1Q9UBI4 398 aa11.07□□□□□ -0.64
PFDN1-202ENST00000507185 IKBKEQ14164 716 aa11.06□□□□□ -0.64
PFDN1-202ENST00000507185 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
PFDN1-202ENST00000507185 UTP4Q969X6 686 aaKnown RBP11.06□□□□□ -0.64
PFDN1-202ENST00000507185 LATS2Q9NRM7 1088 aa11.06□□□□□ -0.64
PFDN1-202ENST00000507185 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
PFDN1-202ENST00000507185 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
PFDN1-202ENST00000507185 UVSSAQ2YD98 709 aa11.05□□□□□ -0.64
PFDN1-202ENST00000507185 PEAR1Q5VY43 1037 aaPredicted RBP11.05□□□□□ -0.64
PFDN1-202ENST00000507185 NALCNQ8IZF0 1738 aa11.05□□□□□ -0.64
PFDN1-202ENST00000507185 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
PFDN1-202ENST00000507185 BHLHE41Q9C0J9 482 aaPredicted RBP11.05□□□□□ -0.64
PFDN1-202ENST00000507185 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
PFDN1-202ENST00000507185 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
PFDN1-202ENST00000507185 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
PFDN1-202ENST00000507185 SART1O43290 800 aaKnown RBP11.04□□□□□ -0.64
PFDN1-202ENST00000507185 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
PFDN1-202ENST00000507185 VN1R5Q7Z5H4 357 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 WAPLQ7Z5K2 1190 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 RNF208Q9H0X6 261 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 MYOM2P54296 1465 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
PFDN1-202ENST00000507185 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
PFDN1-202ENST00000507185 NDUFB5O43674 189 aa11.03□□□□□ -0.64
PFDN1-202ENST00000507185 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
PFDN1-202ENST00000507185 FAM46AQ96IP4 442 aaKnown RBP11.03□□□□□ -0.64
PFDN1-202ENST00000507185 RUSC1Q9BVN2 902 aa11.03□□□□□ -0.64
PFDN1-202ENST00000507185 RALGAPBQ86X10 1494 aa11.03□□□□□ -0.64
PFDN1-202ENST00000507185 GSC2O15499 205 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 HYAL3O43820 417 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-202ENST00000507185 NEFLP07196 543 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 RBM25P49756 843 aaKnown RBP11.02□□□□□ -0.65
PFDN1-202ENST00000507185 ECM1Q16610 540 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 ANKRD34AQ69YU3 496 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.65
PFDN1-202ENST00000507185 PATL2C9JE40 543 aaKnown RBP11.01□□□□□ -0.65
PFDN1-202ENST00000507185 BRD1O95696 1058 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 KCNA1Q09470 495 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 FDX2Q6P4F2 183 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 MYRFLQ96LU7 910 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 NAIPQ13075 1403 aa11.01□□□□□ -0.65
PFDN1-202ENST00000507185 ARHGAP4P98171 946 aa11□□□□□ -0.65
PFDN1-202ENST00000507185 PDE3BQ13370 1112 aa11□□□□□ -0.65
PFDN1-202ENST00000507185 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
PFDN1-202ENST00000507185 PXDNQ92626 1479 aa11□□□□□ -0.65
PFDN1-202ENST00000507185 SPHKAPQ2M3C7 1700 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 METTL12A8MUP2 240 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
PFDN1-202ENST00000507185 GALNT12Q8IXK2 581 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 SOX17Q9H6I2 414 aaPredicted RBP10.99□□□□□ -0.65
PFDN1-202ENST00000507185 SPATA31A3Q5VYP0 1347 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 RPGRIP1LQ68CZ1 1315 aa10.99□□□□□ -0.65
PFDN1-202ENST00000507185 A0A1W2PP55 124 aa10.98□□□□□ -0.65
PFDN1-202ENST00000507185 ESRRAP11474 423 aaPredicted RBP10.98□□□□□ -0.65
PFDN1-202ENST00000507185 VPS72Q15906 364 aa10.98□□□□□ -0.65
PFDN1-202ENST00000507185 MEGF11A6BM72 1044 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 PREPP48147 710 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 R3HDM1Q15032 1099 aaKnown RBP10.97□□□□□ -0.65
PFDN1-202ENST00000507185 NUTM2GQ5VZR2 741 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 TRIM42Q8IWZ5 723 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
PFDN1-202ENST00000507185 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 CITED4Q96RK1 184 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 KCNF1Q9H3M0 494 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 C7orf69Q9H7B7 122 aa10.97□□□□□ -0.65
PFDN1-202ENST00000507185 LIN7BQ9HAP6 207 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms