RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TRIM75PA6NK02 468 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 TNPO2O14787 897 aaKnown RBP7.21□□□□□ -1.26
GYPB-208ENST00000507009 SGPL1O95470 568 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 SLURP2P0DP57 97 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 PRDX5P30044 214 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 FLT3LGP49771 235 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 PICALMQ13492 652 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 PUM3Q15397 648 aaKnown RBP7.21□□□□□ -1.26
GYPB-208ENST00000507009 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 HHIPL2Q6UWX4 724 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 C7orf61Q8IZ16 206 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 ANKRD44Q8N8A2 993 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 SMCR8Q8TEV9 937 aaPredicted RBP7.21□□□□□ -1.26
GYPB-208ENST00000507009 SIL1Q9H173 461 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 ZMYND8Q9ULU4 1186 aaPredicted RBP7.21□□□□□ -1.26
GYPB-208ENST00000507009 KCNH4Q9UQ05 1017 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 DAGLAQ9Y4D2 1042 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 ZHX2Q9Y6X8 837 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 ADGRA2Q96PE1 1338 aa7.21□□□□□ -1.26
GYPB-208ENST00000507009 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
GYPB-208ENST00000507009 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
GYPB-208ENST00000507009 BCRP11274 1271 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 SYN1P17600 705 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 RGS3P49796 1198 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 MOGSQ13724 837 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 FKBP1CQ5VVH2 108 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 WDR63Q8IWG1 891 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 ANKRD13CQ8N6S4 541 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 VGLL2Q8N8G2 317 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 WDR66Q8TBY9 1149 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 DIS3LQ8TF46 1054 aaKnown RBP7.2□□□□□ -1.26
GYPB-208ENST00000507009 PAWRQ96IZ0 340 aaKnown RBP7.2□□□□□ -1.26
GYPB-208ENST00000507009 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 ZNF112Q9UJU3 913 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 LRRFIP2Q9Y608 721 aaKnown RBP7.2□□□□□ -1.26
GYPB-208ENST00000507009 SZT2Q5T011 3432 aa7.2□□□□□ -1.26
GYPB-208ENST00000507009 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 FAM196BA6NMK8 535 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 CXCL11O14625 94 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 PTPRAP18433 802 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 ATP2B3Q16720 1220 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 RABL6Q3YEC7 729 aaPredicted RBP7.19□□□□□ -1.26
GYPB-208ENST00000507009 NOL9Q5SY16 702 aaKnown RBP7.19□□□□□ -1.26
GYPB-208ENST00000507009 Q7L0L9 218 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 FASTKD5Q7L8L6 764 aaKnown RBP7.19□□□□□ -1.26
GYPB-208ENST00000507009 UBE2Q1Q7Z7E8 422 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 DZIP1Q86YF9 867 aaKnown RBP7.19□□□□□ -1.26
GYPB-208ENST00000507009 SCYL3Q8IZE3 742 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 FAM9BQ8IZU0 186 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 LPIN2Q92539 896 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 COA7Q96BR5 231 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 MRIQ9BWK5 157 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.19□□□□□ -1.26
GYPB-208ENST00000507009 ABCF2Q9UG63 623 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 SUGT1Q9Y2Z0 365 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 DOCK1Q14185 1865 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 MYH2Q9UKX2 1941 aa7.19□□□□□ -1.26
GYPB-208ENST00000507009 A0A0G2JLL6 359 aaPredicted RBP7.18□□□□□ -1.26
GYPB-208ENST00000507009 EYA2O00167 538 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 FGFR2P21802 821 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 PHKA1P46020 1223 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 LSM11P83369 360 aaKnown RBP eCLIP7.18□□□□□ -1.26
GYPB-208ENST00000507009 FOXK1P85037 733 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 TRIM32Q13049 653 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 PRRT2Q7Z6L0 340 aaPredicted RBP7.18□□□□□ -1.26
GYPB-208ENST00000507009 PLPP6Q8IY26 295 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 PRO3102Q9H379 93 aa7.18□□□□□ -1.26
GYPB-208ENST00000507009 GNL3LQ9NVN8 582 aaKnown RBP7.18□□□□□ -1.26
GYPB-208ENST00000507009 PTPRFP10586 1907 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 DDTLA6NHG4 134 aaPredicted RBP7.17□□□□□ -1.26
GYPB-208ENST00000507009 PHF20L1A8MW92 1017 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 ADORA1P30542 326 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 BTDP43251 543 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 POTEEQ6S8J3 1075 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 SH3BP5LQ7L8J4 393 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 MRPL50Q8N5N7 158 aaKnown RBP7.17□□□□□ -1.26
GYPB-208ENST00000507009 DDX4Q9NQI0 724 aaKnown RBP7.17□□□□□ -1.26
GYPB-208ENST00000507009 GPHNQ9NQX3 736 aaPredicted RBP7.17□□□□□ -1.26
GYPB-208ENST00000507009 CEP126Q9P2H0 1117 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 AGTPBP1Q9UPW5 1226 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 AFG3L2Q9Y4W6 797 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 UTYO14607 1347 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 PHIPQ8WWQ0 1821 aa7.17□□□□□ -1.26
GYPB-208ENST00000507009 DDX60LQ5H9U9 1706 aaKnown RBP7.16□□□□□ -1.26
GYPB-208ENST00000507009 ATAD5Q96QE3 1844 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 A0A1W2PPC1 479 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 PBX2P40425 430 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 SPP2Q13103 211 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 IRF5Q13568 498 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 DSG2Q14126 1118 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 ATG9AQ7Z3C6 839 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 PXYLP1Q8TE99 480 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 PTCD2Q8WV60 388 aaKnown RBP7.16□□□□□ -1.26
GYPB-208ENST00000507009 UBE2OQ9C0C9 1292 aaKnown RBP7.16□□□□□ -1.26
GYPB-208ENST00000507009 USP44Q9H0E7 712 aa7.16□□□□□ -1.26
GYPB-208ENST00000507009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.16□□□□□ -1.26
GYPB-208ENST00000507009 HMX1Q9NP08 348 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms