RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PSMG3-AS1Q96PY0 264 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 SPON2Q9BUD6 331 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 TGIF2Q9GZN2 237 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 WNT10AQ9GZT5 417 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 C1GALT1Q9NS00 363 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 STOML1Q9UBI4 398 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 CSADQ9Y600 493 aa4.86□□□□□ -1.63
GYPB-207ENST00000506679 HMX2A2RU54 273 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 DYNC1LI2O43237 492 aaPredicted RBP4.85□□□□□ -1.63
GYPB-207ENST00000506679 NFICP08651 508 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 RAB6AP20340 208 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 MAP7Q14244 749 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 RNF43Q68DV7 783 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 SLC51AQ86UW1 340 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 SLITRK4Q8IW52 837 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 KCNF1Q9H3M0 494 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 PIDD1Q9HB75 910 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 UBP1Q9NZI7 540 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 PRKAG2Q9UGJ0 569 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 PCOLCE2Q9UKZ9 415 aa4.85□□□□□ -1.63
GYPB-207ENST00000506679 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.85□□□□□ -1.63
GYPB-207ENST00000506679 POLR3KQ9Y2Y1 108 aaPredicted RBP4.85□□□□□ -1.63
GYPB-207ENST00000506679 PRAMEF27A3QJZ7 478 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 GSC2O15499 205 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 BPNT1O95861 308 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 FSTP19883 344 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 GJA8P48165 433 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 SLBPQ14493 270 aaKnown RBP eCLIP4.84□□□□□ -1.63
GYPB-207ENST00000506679 TMEM201Q5SNT2 666 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 PAOXQ6QHF9 649 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 KCT2Q8NC54 265 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 RASGRP4Q8TDF6 673 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 DBNDD2Q9BQY9 259 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 FBRSQ9HAH7 460 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 ADAM30Q9UKF2 790 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 DAGLAQ9Y4D2 1042 aa4.84□□□□□ -1.63
GYPB-207ENST00000506679 ADAM23O75077 832 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 ATE1O95260 518 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 IGLV1-40P01703 118 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 RXRBP28702 533 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 GRK4P32298 578 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 NFIAQ12857 509 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 PAK2Q13177 524 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 CWF19L2Q2TBE0 894 aaKnown RBP4.83□□□□□ -1.64
GYPB-207ENST00000506679 PRSS36Q5K4E3 855 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 DIEXFQ68CQ4 756 aaKnown RBP4.83□□□□□ -1.64
GYPB-207ENST00000506679 ZAR1Q86SH2 424 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 MRPL41Q8IXM3 137 aaKnown RBP4.83□□□□□ -1.64
GYPB-207ENST00000506679 ZNF507Q8TCN5 953 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 EHMT1Q9H9B1 1298 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 CORINQ9Y5Q5 1042 aa4.83□□□□□ -1.64
GYPB-207ENST00000506679 K7ELQ4 463 aaPredicted RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 TLR3O15455 904 aaKnown RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 RNGTTO60942 597 aaKnown RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 ERCC5P28715 1186 aaPredicted RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 ADMP35318 185 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 ETF1P62495 437 aaKnown RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 PDE4BQ07343 736 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 APOBRQ0VD83 1088 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 NFKBIBQ15653 356 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 NKG7Q16617 165 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 ZDHHC13Q8IUH4 622 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 HID1Q8IV36 788 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
GYPB-207ENST00000506679 SHISA5Q8N114 240 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 REXO1Q8N1G1 1221 aaKnown RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 ACSF2Q96CM8 615 aaPredicted RBP4.82□□□□□ -1.64
GYPB-207ENST00000506679 ACBD3Q9H3P7 528 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 SEMA6BQ9H3T3 888 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 BRMS1Q9HCU9 246 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 TJP2Q9UDY2 1190 aa4.82□□□□□ -1.64
GYPB-207ENST00000506679 LRIG2O94898 1065 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 HTR3BO95264 441 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 F13BP05160 661 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 PGRP06401 933 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 CDK5R2Q13319 367 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 CPSF6Q16630 551 aaKnown RBP eCLIP4.81□□□□□ -1.64
GYPB-207ENST00000506679 SEZ6Q53EL9 994 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 MCATQ8IVS2 390 aaKnown RBP4.81□□□□□ -1.64
GYPB-207ENST00000506679 NKD1Q969G9 470 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 GPRASP2Q96D09 838 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 TMEM87BQ96K49 555 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 SPATA32Q96LK8 384 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 MFSD14AQ96MC6 490 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 TINF2Q9BSI4 451 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 PICK1Q9NRD5 415 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 REV1Q9UBZ9 1251 aa4.81□□□□□ -1.64
GYPB-207ENST00000506679 PRR19A6NJB7 356 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 MEIS3P2A8K0S8 358 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 GRIN3BO60391 1043 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 DNAJA2O60884 412 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 CST3P01034 146 aaPredicted RBP4.8□□□□□ -1.64
GYPB-207ENST00000506679 PLCG1P19174 1290 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 SOX9P48436 509 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 TNNI2P48788 182 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 COL9A2Q14055 689 aaPredicted RBP4.8□□□□□ -1.64
GYPB-207ENST00000506679 SLC6A19Q695T7 634 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 OGFOD3Q6PK18 319 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 CDC37L1Q7L3B6 337 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 ARMCX6Q7L4S7 300 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms