RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 DAGLAQ9Y4D2 1042 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 DCAF1Q9Y4B6 1507 aa9.21□□□□□ -0.94
NIPBL-205ENST00000505998 NEFMP07197 916 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 ETF1P62495 437 aaKnown RBP9.2□□□□□ -0.94
NIPBL-205ENST00000505998 RAD51AP2Q09MP3 1159 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 RSPO4Q2I0M5 234 aaPredicted RBP9.2□□□□□ -0.94
NIPBL-205ENST00000505998 NKAPLQ5M9Q1 402 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 ZBTB37Q5TC79 503 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 FAM83CQ9BQN1 747 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 NT5C1AQ9BXI3 368 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 SEMA6CQ9H3T2 930 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 TACC3Q9Y6A5 838 aa9.2□□□□□ -0.94
NIPBL-205ENST00000505998 APOBRQ0VD83 1088 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 CWF19L2Q2TBE0 894 aaKnown RBP9.19□□□□□ -0.94
NIPBL-205ENST00000505998 CDC37L1Q7L3B6 337 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 REC114Q7Z4M0 266 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 ISL2Q96A47 359 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 EAF1Q96JC9 268 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-205ENST00000505998 LRRC3Q9BY71 257 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 WNT10AQ9GZT5 417 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 PCOLCE2Q9UKZ9 415 aa9.19□□□□□ -0.94
NIPBL-205ENST00000505998 HMX2A2RU54 273 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 FURINP09958 794 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 GRK4P32298 578 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
NIPBL-205ENST00000505998 KCT2Q8NC54 265 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 ZNF507Q8TCN5 953 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 NKD1Q969G9 470 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 LGR6Q9HBX8 967 aa9.18□□□□□ -0.94
NIPBL-205ENST00000505998 NTF4P34130 210 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 CRKP46108 304 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 PDE4BQ07343 736 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 PAK2Q13177 524 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 SEZ6Q53EL9 994 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 ACBD3Q9H3P7 528 aa9.17□□□□□ -0.94
NIPBL-205ENST00000505998 ABCC9O60706 1549 aa9.16□□□□□ -0.94
NIPBL-205ENST00000505998 DYRK3O43781 588 aa9.16□□□□□ -0.94
NIPBL-205ENST00000505998 PGRP06401 933 aa9.16□□□□□ -0.94
NIPBL-205ENST00000505998 INPP5FQ9Y2H2 1132 aa9.16□□□□□ -0.94
NIPBL-205ENST00000505998 GRIN3BO60391 1043 aa9.15□□□□□ -0.94
NIPBL-205ENST00000505998 MCM4P33991 863 aa9.15□□□□□ -0.94
NIPBL-205ENST00000505998 BRMS1Q9HCU9 246 aa9.15□□□□□ -0.94
NIPBL-205ENST00000505998 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-205ENST00000505998 GSC2O15499 205 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 DYNC1LI2O43237 492 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-205ENST00000505998 PLCG1P19174 1290 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 HID1Q8IV36 788 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 SLITRK4Q8IW52 837 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 GPRASP2Q96D09 838 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 CORINQ9Y5Q5 1042 aa9.14□□□□□ -0.95
NIPBL-205ENST00000505998 FSTP19883 344 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 TNNI2P48788 182 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 NFIAQ12857 509 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 UBE3DQ7Z6J8 389 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 TBC1D32Q96NH3 1257 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 SEMA6BQ9H3T3 888 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 FBRSQ9HAH7 460 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 ADAM30Q9UKF2 790 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 PCDHB14Q9Y5E9 798 aa9.13□□□□□ -0.95
NIPBL-205ENST00000505998 HTR3BO95264 441 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 IGLV1-40P01703 118 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 GJA8P48165 433 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 ZNF165P49910 485 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 DBNDD2Q9BQY9 259 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
NIPBL-205ENST00000505998 PRR36Q9H6K5 1346 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 CDK5R2Q13319 367 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
NIPBL-205ENST00000505998 MLECQ14165 292 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 NKG7Q16617 165 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 GK5Q6ZS86 529 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 REXO1Q8N1G1 1221 aaKnown RBP9.11□□□□□ -0.95
NIPBL-205ENST00000505998 FBXL6Q8N531 539 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 RASGRP4Q8TDF6 673 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 REV1Q9UBZ9 1251 aa9.11□□□□□ -0.95
NIPBL-205ENST00000505998 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
NIPBL-205ENST00000505998 MRPL41Q8IXM3 137 aaKnown RBP9.1□□□□□ -0.95
NIPBL-205ENST00000505998 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-205ENST00000505998 TMEM87BQ96K49 555 aa9.1□□□□□ -0.95
NIPBL-205ENST00000505998 FOXQ1Q9C009 403 aa9.1□□□□□ -0.95
NIPBL-205ENST00000505998 TJP2Q9UDY2 1190 aa9.1□□□□□ -0.95
NIPBL-205ENST00000505998 NACADO15069 1562 aa9.1□□□□□ -0.95
NIPBL-205ENST00000505998 LRIG2O94898 1065 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 ADMP35318 185 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 CAP2P40123 477 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 CLCQ05315 142 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 COL9A2Q14055 689 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-205ENST00000505998 SLBPQ14493 270 aaKnown RBP eCLIP9.09□□□□□ -0.95
NIPBL-205ENST00000505998 TMEM201Q5SNT2 666 aa9.09□□□□□ -0.95
NIPBL-205ENST00000505998 SLC6A19Q695T7 634 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms