RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 HSP90AB4PQ58FF6 505 aa13.06□□□□□ -0.32
CPNE4-206ENST00000505957 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
CPNE4-206ENST00000505957 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
CPNE4-206ENST00000505957 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
CPNE4-206ENST00000505957 CTNND1O60716 968 aaKnown RBP13.05□□□□□ -0.32
CPNE4-206ENST00000505957 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
CPNE4-206ENST00000505957 ZGPATQ8N5A5 531 aaKnown RBP13.05□□□□□ -0.32
CPNE4-206ENST00000505957 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
CPNE4-206ENST00000505957 GAKO14976 1311 aa13.05□□□□□ -0.32
CPNE4-206ENST00000505957 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 TNPO2O14787 897 aaKnown RBP13.04□□□□□ -0.32
CPNE4-206ENST00000505957 EVI5O60447 810 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 INHAP05111 366 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 PLEKHM2Q8IWE5 1019 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-206ENST00000505957 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 CRISPLD2Q9H0B8 497 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-206ENST00000505957 SALL3Q9BXA9 1300 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
CPNE4-206ENST00000505957 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 ELNP15502 786 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 IL15P40933 162 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 SLF2Q8IX21 1173 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 COA7Q96BR5 231 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 AGTPBP1Q9UPW5 1226 aa13.03□□□□□ -0.32
CPNE4-206ENST00000505957 PDS5AQ29RF7 1337 aaKnown RBP13.03□□□□□ -0.32
CPNE4-206ENST00000505957 DDTLA6NHG4 134 aaPredicted RBP13.02□□□□□ -0.33
CPNE4-206ENST00000505957 TBC1D12O60347 775 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
CPNE4-206ENST00000505957 PHKA1P46020 1223 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
CPNE4-206ENST00000505957 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 DEFB118Q96PH6 123 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
CPNE4-206ENST00000505957 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
CPNE4-206ENST00000505957 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
CPNE4-206ENST00000505957 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 PROCA1Q8NCQ7 364 aaPredicted RBP13.01□□□□□ -0.33
CPNE4-206ENST00000505957 SIL1Q9H173 461 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 STAP2Q9UGK3 403 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
CPNE4-206ENST00000505957 AK9Q5TCS8 1911 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 MYH13Q9UKX3 1938 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 TRIM75PA6NK02 468 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 BMP8BP34820 402 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 BTDP43251 543 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 GCLCP48506 637 aaPredicted RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 GPR153Q6NV75 609 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 NECAB2Q7Z6G3 386 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 SLC17A8Q8NDX2 589 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 COPRSQ9NQ92 184 aa13□□□□□ -0.33
CPNE4-206ENST00000505957 DDX4Q9NQI0 724 aaKnown RBP13□□□□□ -0.33
CPNE4-206ENST00000505957 MGAMO43451 1857 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 MROH7-TTC4A0A0A0MT08 1334 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-206ENST00000505957 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
CPNE4-206ENST00000505957 PDE1AP54750 535 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE4-206ENST00000505957 ABCF2Q9UG63 623 aa12.99□□□□□ -0.33
CPNE4-206ENST00000505957 DLL1O00548 723 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 HMGCRP04035 888 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
CPNE4-206ENST00000505957 ADORA1P30542 326 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 RHBDL3P58872 404 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE4-206ENST00000505957 PICALMQ13492 652 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 GDF15Q99988 308 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE4-206ENST00000505957 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
CPNE4-206ENST00000505957 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
CPNE4-206ENST00000505957 SLURP2P0DP57 97 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 MECOMQ03112 1051 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 SH3D19Q5HYK7 790 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 ERICH6Q7L0X2 663 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
CPNE4-206ENST00000505957 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms