RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 ANKLE1Q8NAG6 615 aa20.9■□□□□ 0.94
DDR1-257ENST00000505534 SLC17A8Q8NDX2 589 aa20.9■□□□□ 0.94
DDR1-257ENST00000505534 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.9■□□□□ 0.949e-6■■■■■ 32.4
DDR1-257ENST00000505534 AKAP2Q9Y2D5 859 aa20.9■□□□□ 0.94
DDR1-257ENST00000505534 LAMA3Q16787 3333 aa20.89■□□□□ 0.93
DDR1-257ENST00000505534 SPP2Q13103 211 aa20.89■□□□□ 0.93
DDR1-257ENST00000505534 MVPQ14764 893 aaKnown RBP20.89■□□□□ 0.93
DDR1-257ENST00000505534 ZNF280CQ8ND82 737 aa20.89■□□□□ 0.93
DDR1-257ENST00000505534 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
DDR1-257ENST00000505534 COL6A3P12111 3177 aa20.89■□□□□ 0.93
DDR1-257ENST00000505534 A0A1B0GUL7 405 aa20.88■□□□□ 0.93
DDR1-257ENST00000505534 SOX1O00570 391 aaPredicted RBP20.88■□□□□ 0.93
DDR1-257ENST00000505534 HMGCRP04035 888 aa20.88■□□□□ 0.93
DDR1-257ENST00000505534 LDHCP07864 332 aa20.88■□□□□ 0.93
DDR1-257ENST00000505534 NOB1Q9ULX3 412 aaKnown RBP20.88■□□□□ 0.93
DDR1-257ENST00000505534 COL2A1P02458 1487 aaPredicted RBP20.88■□□□□ 0.93
DDR1-257ENST00000505534 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 BMP8BP34820 402 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 GSTO1P78417 241 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 MIER1Q8N108 512 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 ZNF384Q8TF68 577 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 LRCH3Q96II8 777 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 API5Q9BZZ5 524 aaKnown RBP20.87■□□□□ 0.93
DDR1-257ENST00000505534 HMX1Q9NP08 348 aaPredicted RBP20.87■□□□□ 0.93
DDR1-257ENST00000505534 GJD2Q9UKL4 321 aa20.87■□□□□ 0.93
DDR1-257ENST00000505534 RPTORQ8N122 1335 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 PLXNB2O15031 1838 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 DLL1O00548 723 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 CAP2P40123 477 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 HMGCS2P54868 508 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 SH3D19Q5HYK7 790 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 DIS3LQ8TF46 1054 aaKnown RBP20.86■□□□□ 0.93
DDR1-257ENST00000505534 GDF15Q99988 308 aa20.86■□□□□ 0.93
DDR1-257ENST00000505534 ASCC2Q9H1I8 757 aaPredicted RBP20.86■□□□□ 0.93
DDR1-257ENST00000505534 USP17L5A8MUK1 530 aa20.85■□□□□ 0.93
DDR1-257ENST00000505534 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
DDR1-257ENST00000505534 TFCP2Q12800 502 aa20.85■□□□□ 0.93
DDR1-257ENST00000505534 NSUN4Q96CB9 384 aaKnown RBP20.85■□□□□ 0.93
DDR1-257ENST00000505534 MEIS3Q99687 375 aa20.85■□□□□ 0.93
DDR1-257ENST00000505534 NBPF3Q9H094 633 aa20.85■□□□□ 0.93
DDR1-257ENST00000505534 GPR153Q6NV75 609 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 C7orf61Q8IZ16 206 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 AS3MTQ9HBK9 375 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 HMG20BQ9P0W2 317 aa20.84■□□□□ 0.93
DDR1-257ENST00000505534 HERC5Q9UII4 1024 aaKnown RBP20.84■□□□□ 0.93
DDR1-257ENST00000505534 SRGAP3O43295 1099 aa20.83■□□□□ 0.93
DDR1-257ENST00000505534 TRMT2AQ8IZ69 625 aaKnown RBP20.83■□□□□ 0.93
DDR1-257ENST00000505534 SPATA5Q8NB90 893 aa20.83■□□□□ 0.93
DDR1-257ENST00000505534 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.93
DDR1-257ENST00000505534 DDX60LQ5H9U9 1706 aaKnown RBP20.83■□□□□ 0.92
DDR1-257ENST00000505534 GNAI3P08754 354 aa20.82■□□□□ 0.92
DDR1-257ENST00000505534 RRP1BQ14684 758 aaKnown RBP20.82■□□□□ 0.92
DDR1-257ENST00000505534 GORABQ5T7V8 394 aa20.82■□□□□ 0.92
DDR1-257ENST00000505534 RAI14Q9P0K7 980 aa20.82■□□□□ 0.92
DDR1-257ENST00000505534 A0A0C4DFX4 3053 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 TRIM32Q13049 653 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 MTX1Q13505 466 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 TEX11Q8IYF3 940 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 WDR18Q9BV38 432 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 C11orf49Q9H6J7 331 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 PI4KBQ9UBF8 816 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 OGDHLQ9ULD0 1010 aa20.81■□□□□ 0.92
DDR1-257ENST00000505534 ZMYND8Q9ULU4 1186 aaPredicted RBP20.81■□□□□ 0.92
DDR1-257ENST00000505534 ARID4AP29374 1257 aaPredicted RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 HOXA7P31268 230 aaPredicted RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 MNX1P50219 401 aaPredicted RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 IRX3P78415 501 aaPredicted RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 PI16Q6UXB8 463 aa20.8■□□□□ 0.92
DDR1-257ENST00000505534 DHX36Q9H2U1 1008 aaKnown RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.8■□□□□ 0.92
DDR1-257ENST00000505534 CDK5RAP2Q96SN8 1893 aa20.79■□□□□ 0.92
DDR1-257ENST00000505534 SIPA1L1O43166 1804 aa20.79■□□□□ 0.92
DDR1-257ENST00000505534 XRCC5P13010 732 aaKnown RBP20.79■□□□□ 0.92
DDR1-257ENST00000505534 BACE1P56817 501 aa20.79■□□□□ 0.92
DDR1-257ENST00000505534 TRIB2Q92519 343 aa20.79■□□□□ 0.92
DDR1-257ENST00000505534 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
DDR1-257ENST00000505534 TMOD4Q9NZQ9 345 aa20.79■□□□□ 0.92
DDR1-257ENST00000505534 C19orf81C9J6K1 198 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 ASNSP08243 561 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 CYP2B6P20813 491 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 MTMR2Q13614 643 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 LRIT3Q3SXY7 679 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 MAP3K21Q5TCX8 1036 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 GPRC5AQ8NFJ5 357 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 SH3RF3Q8TEJ3 882 aaPredicted RBP20.78■□□□□ 0.92
DDR1-257ENST00000505534 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 ARHGAP45Q92619 1136 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 P2RX7Q99572 595 aaKnown RBP20.78■□□□□ 0.92
DDR1-257ENST00000505534 NUDT12Q9BQG2 462 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 LRP2BPQ9P2M1 347 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 FOCADQ5VW36 1801 aa20.78■□□□□ 0.92
DDR1-257ENST00000505534 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
DDR1-257ENST00000505534 PLCG2P16885 1265 aa20.77■□□□□ 0.92
DDR1-257ENST00000505534 MCAMP43121 646 aa20.77■□□□□ 0.92
DDR1-257ENST00000505534 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
DDR1-257ENST00000505534 TRMT44Q8IYL2 757 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms