RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GCLCP48506 637 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 MAP3K10Q02779 954 aa19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 TRIM32Q13049 653 aa19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 IDI2Q9BXS1 227 aa19.82■□□□□ 0.76
PDLIM7-213ENST00000505074 LOC285556D6RIA3 1793 aa19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 PHKA1P46020 1223 aa19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 GJD2Q9UKL4 321 aa19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 DENND2AQ9ULE3 1009 aa19.81■□□□□ 0.76
PDLIM7-213ENST00000505074 PFASO15067 1338 aa19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 POTEB2H3BUK9 544 aa19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 IPO8O15397 1037 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 SRGAP3O43295 1099 aa19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.763e-8■□□□□ 8.5
PDLIM7-213ENST00000505074 ARHGAP45Q92619 1136 aa19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 GUCD1Q96NT3 240 aa19.8■□□□□ 0.76
PDLIM7-213ENST00000505074 ATAD5Q96QE3 1844 aa19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 ADORA1P30542 326 aa19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 MDM2Q00987 491 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 TRIB2Q92519 343 aa19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 COPRSQ9NQ92 184 aa19.79■□□□□ 0.76
PDLIM7-213ENST00000505074 SALL1Q9NSC2 1324 aa19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 SEMA3EO15041 775 aa19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 CCDC102BQ68D86 513 aa19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 CCDC84Q86UT8 332 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 CLUAP1Q96AJ1 413 aa19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 FAM161BQ96MY7 647 aa19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-213ENST00000505074 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 PRKAR2AP13861 404 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 MAP3K21Q5TCX8 1036 aa19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 DZIP1Q86YF9 867 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 ZGPATQ8N5A5 531 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 ABCF2Q9UG63 623 aa19.77■□□□□ 0.76
PDLIM7-213ENST00000505074 COL2A1P02458 1487 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 RFX7Q2KHR2 1363 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 BCAR3O75815 825 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 SLURP2P0DP57 97 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 COL6A1P12109 1028 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 TRIM27P14373 513 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 CYP2B6P20813 491 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 TIMM10P62072 90 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 TFCP2Q12800 502 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 SPP2Q13103 211 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 ZNF697Q5TEC3 545 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 TNNQ9UQP3 1299 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 AKAP2Q9Y2D5 859 aa19.76■□□□□ 0.75
PDLIM7-213ENST00000505074 A0A1B0GUL7 405 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 GNAI2P04899 355 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 PICALMQ13492 652 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 LRRC26Q2I0M4 334 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 GORABQ5T7V8 394 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 ATF7IPQ6VMQ6 1270 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 SLF2Q8IX21 1173 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 ZNF280CQ8ND82 737 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 NEUROD6Q96NK8 337 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 LBHD1Q9BQE6 289 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 NUDT12Q9BQG2 462 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 TBC1D2Q9BYX2 928 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 ASCC2Q9H1I8 757 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 PRDM6Q9NQX0 595 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 GAKO14976 1311 aa19.75■□□□□ 0.75
PDLIM7-213ENST00000505074 TBC1D12O60347 775 aa19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 XRCC5P13010 732 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 HMGCS2P54868 508 aa19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 RASGRF1Q13972 1273 aa19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 TRMT44Q8IYL2 757 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 DDX4Q9NQI0 724 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 MORF4L1Q9UBU8 362 aa19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 FRMPD3Q5JV73 1810 aa19.74■□□□□ 0.75
PDLIM7-213ENST00000505074 HNRNPUQ00839 825 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM7-213ENST00000505074 SOCS4Q8WXH5 440 aa19.73■□□□□ 0.75
PDLIM7-213ENST00000505074 XAGE2Q96GT9 111 aa19.73■□□□□ 0.75
PDLIM7-213ENST00000505074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■■■■ 52.9
PDLIM7-213ENST00000505074 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-213ENST00000505074 MTX1Q13505 466 aa19.72■□□□□ 0.75
PDLIM7-213ENST00000505074 SPTY2D1Q68D10 685 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-213ENST00000505074 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
PDLIM7-213ENST00000505074 BTDP43251 543 aa19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 CACNB2Q08289 660 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 ZKSCAN2Q63HK3 967 aa19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 FAM163AQ96GL9 167 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-213ENST00000505074 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 USP17L5A8MUK1 530 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 IRX3P78415 501 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 SH3D19Q5HYK7 790 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 LHX8Q68G74 356 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 MAFAQ8NHW3 353 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 AS3MTQ9HBK9 375 aa19.7■□□□□ 0.74
PDLIM7-213ENST00000505074 CCND3P30281 292 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-213ENST00000505074 OS9Q13438 667 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms