RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 PICK1Q9NRD5 415 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 IGSF5Q9NSI5 407 aa8.48□□□□□ -1.05
COPS4-203ENST00000504274 SUPT16HQ9Y5B9 1047 aaKnown RBP8.48□□□□□ -1.05
COPS4-203ENST00000504274 FANCGO15287 622 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 FSTP19883 344 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 ADMP35318 185 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 FBRSQ9HAH7 460 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 C1GALT1Q9NS00 363 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 UBP1Q9NZI7 540 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 PRKAG2Q9UGJ0 569 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
COPS4-203ENST00000504274 CORINQ9Y5Q5 1042 aa8.47□□□□□ -1.05
COPS4-203ENST00000504274 GRK4P32298 578 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 MAP7Q14244 749 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 RNF43Q68DV7 783 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 PAOXQ6QHF9 649 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 GATA6Q92908 595 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 SPON2Q9BUD6 331 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 WNT10AQ9GZT5 417 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 PCOLCE2Q9UKZ9 415 aa8.46□□□□□ -1.06
COPS4-203ENST00000504274 K7ELQ4 463 aaPredicted RBP8.45□□□□□ -1.06
COPS4-203ENST00000504274 BPNT1O95861 308 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 MPP2Q14168 576 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 PRSS36Q5K4E3 855 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 KIAA0825Q8IV33 1275 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.45□□□□□ -1.06
COPS4-203ENST00000504274 ZNF654Q8IZM8 581 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 MFSD14AQ96MC6 490 aa8.45□□□□□ -1.06
COPS4-203ENST00000504274 SSU72Q9NP77 194 aaKnown RBP8.45□□□□□ -1.06
COPS4-203ENST00000504274 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.45□□□□□ -1.06
COPS4-203ENST00000504274 GRIN3BO60391 1043 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 ETF1P62495 437 aaKnown RBP8.44□□□□□ -1.06
COPS4-203ENST00000504274 NFIAQ12857 509 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 CDK5R2Q13319 367 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 REC114Q7Z4M0 266 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 NT5C1AQ9BXI3 368 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 LRRC3Q9BY71 257 aa8.44□□□□□ -1.06
COPS4-203ENST00000504274 ADAM23O75077 832 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 NKG7Q16617 165 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 FBXL6Q8N531 539 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 TACC3Q9Y6A5 838 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
COPS4-203ENST00000504274 F13BP05160 661 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 PGRP06401 933 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 ERCC5P28715 1186 aaPredicted RBP8.42□□□□□ -1.06
COPS4-203ENST00000504274 APOBRQ0VD83 1088 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 PAK2Q13177 524 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 SLBPQ14493 270 aaKnown RBP eCLIP8.42□□□□□ -1.06
COPS4-203ENST00000504274 SEZ6Q53EL9 994 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 CDC37L1Q7L3B6 337 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 TGIF2Q9GZN2 237 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 TJP2Q9UDY2 1190 aa8.42□□□□□ -1.06
COPS4-203ENST00000504274 TNNI2P48788 182 aa8.41□□□□□ -1.06
COPS4-203ENST00000504274 ZAR1Q86SH2 424 aa8.41□□□□□ -1.06
COPS4-203ENST00000504274 SHKBP1Q8TBC3 707 aa8.41□□□□□ -1.06
COPS4-203ENST00000504274 TBC1D32Q96NH3 1257 aa8.41□□□□□ -1.06
COPS4-203ENST00000504274 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 WDR64B1ANS9 1081 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 LEFTY1O75610 366 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 CWF19L2Q2TBE0 894 aaKnown RBP8.4□□□□□ -1.06
COPS4-203ENST00000504274 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
COPS4-203ENST00000504274 HID1Q8IV36 788 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 NKD1Q969G9 470 aa8.4□□□□□ -1.06
COPS4-203ENST00000504274 ACSF2Q96CM8 615 aaPredicted RBP8.4□□□□□ -1.06
COPS4-203ENST00000504274 DNAJA2O60884 412 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 HTR3BO95264 441 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 PLCG1P19174 1290 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 CLCQ05315 142 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 ARMCX6Q7L4S7 300 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 ZDHHC13Q8IUH4 622 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 KCT2Q8NC54 265 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 DPH2Q9BQC3 489 aaPredicted RBP8.39□□□□□ -1.07
COPS4-203ENST00000504274 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 REV1Q9UBZ9 1251 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 PCDHB14Q9Y5E9 798 aa8.39□□□□□ -1.07
COPS4-203ENST00000504274 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 FAM87AP0C7U9 286 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 PDE4BQ07343 736 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 ZNF765Q7L2R6 523 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 TOP6BLQ8N6T0 577 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 TMEM87BQ96K49 555 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 FOXQ1Q9C009 403 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 ADAM30Q9UKF2 790 aa8.38□□□□□ -1.07
COPS4-203ENST00000504274 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 GSC2O15499 205 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 MCM4P33991 863 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 CAP2P40123 477 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 TMEM201Q5SNT2 666 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 PRAMEF13Q5VWM6 474 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms