RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 CCDC158Q5M9N0 1113 aa28.26■■■□□ 2.11
SSBP2-203ENST00000504174 TTC39AQ5SRH9 613 aa28.26■■■□□ 2.11
SSBP2-203ENST00000504174 CCDC84Q86UT8 332 aaPredicted RBP28.26■■■□□ 2.11
SSBP2-203ENST00000504174 PROCA1Q8NCQ7 364 aaPredicted RBP28.26■■■□□ 2.11
SSBP2-203ENST00000504174 ATAD5Q96QE3 1844 aa28.25■■■□□ 2.11
SSBP2-203ENST00000504174 ADCY3O60266 1144 aa28.25■■■□□ 2.11
SSBP2-203ENST00000504174 BAG3O95817 575 aa28.25■■■□□ 2.11
SSBP2-203ENST00000504174 GPR108Q9NPR9 543 aa28.25■■■□□ 2.11
SSBP2-203ENST00000504174 FLT3LGP49771 235 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 SPP2Q13103 211 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 PABPC4Q13310 644 aaKnown RBP eCLIP28.24■■■□□ 2.11
SSBP2-203ENST00000504174 TMEM57Q8N5G2 664 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 ANKRD13CQ8N6S4 541 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 ZNF280CQ8ND82 737 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 DPF3Q92784 378 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 HERC5Q9UII4 1024 aaKnown RBP28.24■■■□□ 2.11
SSBP2-203ENST00000504174 MAST2Q6P0Q8 1798 aa28.24■■■□□ 2.11
SSBP2-203ENST00000504174 H0YGN5 161 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 PLCG2P16885 1265 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 CAP2P40123 477 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 NAA16Q6N069 864 aaPredicted RBP28.23■■■□□ 2.11
SSBP2-203ENST00000504174 PXYLP1Q8TE99 480 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 COA7Q96BR5 231 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 HTATIP2Q9BUP3 242 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 DHX36Q9H2U1 1008 aaKnown RBP28.23■■■□□ 2.11
SSBP2-203ENST00000504174 AS3MTQ9HBK9 375 aa28.23■■■□□ 2.11
SSBP2-203ENST00000504174 COLQQ9Y215 455 aaPredicted RBP28.23■■■□□ 2.11
SSBP2-203ENST00000504174 USP17L5A8MUK1 530 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 TNNI3KQ59H18 835 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 TREML2Q5T2D2 321 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 SH3RF3Q8TEJ3 882 aaPredicted RBP28.22■■■□□ 2.11
SSBP2-203ENST00000504174 SNRKQ9NRH2 765 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 PI4KBQ9UBF8 816 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 FPGT-TNNI3KV9GXZ4 949 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 LOC285556D6RIA3 1793 aa28.22■■■□□ 2.11
SSBP2-203ENST00000504174 IRF5Q13568 498 aa28.21■■■□□ 2.11
SSBP2-203ENST00000504174 POLA2Q14181 598 aa28.21■■■□□ 2.11
SSBP2-203ENST00000504174 FAM110CQ1W6H9 321 aa28.21■■■□□ 2.11
SSBP2-203ENST00000504174 UNC93B1Q9H1C4 597 aa28.21■■■□□ 2.11
SSBP2-203ENST00000504174 AATFQ9NY61 560 aaKnown RBP eCLIP28.21■■■□□ 2.11
SSBP2-203ENST00000504174 ATP8B2P98198 1209 aa28.2■■■□□ 2.1
SSBP2-203ENST00000504174 SSH3Q8TE77 659 aa28.2■■■□□ 2.1
SSBP2-203ENST00000504174 U2AF1L4Q8WU68 220 aaKnown RBP28.2■■■□□ 2.1
SSBP2-203ENST00000504174 TAOK2Q9UL54 1235 aa28.2■■■□□ 2.1
SSBP2-203ENST00000504174 SURF6O75683 361 aaKnown RBP28.19■■■□□ 2.1
SSBP2-203ENST00000504174 ELNP15502 786 aa28.19■■■□□ 2.1
SSBP2-203ENST00000504174 GCLCP48506 637 aaPredicted RBP28.19■■■□□ 2.1
SSBP2-203ENST00000504174 HMGCS2P54868 508 aa28.19■■■□□ 2.1
SSBP2-203ENST00000504174 FTSJ3Q8IY81 847 aaKnown RBP28.19■■■□□ 2.1
SSBP2-203ENST00000504174 DBNDD2Q9BQY9 259 aa28.19■■■□□ 2.1
SSBP2-203ENST00000504174 TRIM34Q9BYJ4 488 aa28.19■■■□□ 2.1
SSBP2-203ENST00000504174 IGSF3O75054 1194 aa28.18■■■□□ 2.1
SSBP2-203ENST00000504174 INHAP05111 366 aa28.18■■■□□ 2.1
SSBP2-203ENST00000504174 CAPN2P17655 700 aa28.18■■■□□ 2.1
SSBP2-203ENST00000504174 FXR1P51114 621 aaKnown RBP eCLIP28.18■■■□□ 2.1
SSBP2-203ENST00000504174 FARP2O94887 1054 aaPredicted RBP28.17■■■□□ 2.1
SSBP2-203ENST00000504174 SGPL1O95470 568 aa28.17■■■□□ 2.1
SSBP2-203ENST00000504174 TGFBRAP1Q8WUH2 860 aa28.17■■■□□ 2.1
SSBP2-203ENST00000504174 PPP4CP60510 307 aa28.16■■■□□ 2.1
SSBP2-203ENST00000504174 SH3D19Q5HYK7 790 aa28.16■■■□□ 2.1
SSBP2-203ENST00000504174 UBE2Q1Q7Z7E8 422 aa28.16■■■□□ 2.1
SSBP2-203ENST00000504174 ZNF512BQ96KM6 892 aaPredicted RBP28.16■■■□□ 2.1
SSBP2-203ENST00000504174 CYP2E1P05181 493 aaPredicted RBP28.15■■■□□ 2.1
SSBP2-203ENST00000504174 ASNSP08243 561 aa28.15■■■□□ 2.1
SSBP2-203ENST00000504174 RRP1BQ14684 758 aaKnown RBP28.15■■■□□ 2.1
SSBP2-203ENST00000504174 FOXP4Q8IVH2 680 aaPredicted RBP28.15■■■□□ 2.1
SSBP2-203ENST00000504174 MAPKAPK5Q8IW41 473 aa28.15■■■□□ 2.1
SSBP2-203ENST00000504174 CRACR2BQ8N4Y2 399 aaPredicted RBP28.15■■■□□ 2.1
SSBP2-203ENST00000504174 FOCADQ5VW36 1801 aa28.15■■■□□ 2.1
SSBP2-203ENST00000504174 TFRCP02786 760 aaKnown RBP28.14■■■□□ 2.1
SSBP2-203ENST00000504174 ITPRIPQ8IWB1 547 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 WDR18Q9BV38 432 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 ASCC2Q9H1I8 757 aaPredicted RBP28.14■■■□□ 2.1
SSBP2-203ENST00000504174 C1orf115Q9H7X2 142 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 TMOD4Q9NZQ9 345 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 NR2E3Q9Y5X4 410 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 CDK5RAP2Q96SN8 1893 aa28.14■■■□□ 2.1
SSBP2-203ENST00000504174 FLT1P17948 1338 aa28.14■■■□□ 2.09
SSBP2-203ENST00000504174 SIPA1L1O43166 1804 aa28.13■■■□□ 2.09
SSBP2-203ENST00000504174 ZAP70P43403 619 aa28.13■■■□□ 2.09
SSBP2-203ENST00000504174 CHRDL2Q6WN34 429 aa28.13■■■□□ 2.09
SSBP2-203ENST00000504174 HLA-DOAP06340 250 aa28.12■■■□□ 2.09
SSBP2-203ENST00000504174 IRX3P78415 501 aaPredicted RBP28.12■■■□□ 2.09
SSBP2-203ENST00000504174 MTMR2Q13614 643 aa28.12■■■□□ 2.09
SSBP2-203ENST00000504174 ADGRA1Q86SQ6 560 aa28.12■■■□□ 2.09
SSBP2-203ENST00000504174 DEFB118Q96PH6 123 aa28.12■■■□□ 2.09
SSBP2-203ENST00000504174 GINM1Q9NU53 330 aa28.12■■■□□ 2.09
SSBP2-203ENST00000504174 NOP58Q9Y2X3 529 aaKnown RBP28.12■■■□□ 2.09
SSBP2-203ENST00000504174 BACE1P56817 501 aa28.11■■■□□ 2.09
SSBP2-203ENST00000504174 HNRNPUQ00839 825 aaKnown RBP eCLIP28.11■■■□□ 2.09
SSBP2-203ENST00000504174 PALD1Q9ULE6 856 aa28.11■■■□□ 2.09
SSBP2-203ENST00000504174 MYO5AQ9Y4I1 1855 aaKnown RBP28.1■■■□□ 2.09
SSBP2-203ENST00000504174 C19orf81C9J6K1 198 aa28.1■■■□□ 2.09
SSBP2-203ENST00000504174 METTL16Q86W50 562 aaKnown RBP28.1■■■□□ 2.09
SSBP2-203ENST00000504174 CERS3Q8IU89 383 aa28.1■■■□□ 2.09
SSBP2-203ENST00000504174 PAK6Q9NQU5 681 aaPredicted RBP28.1■■■□□ 2.09
SSBP2-203ENST00000504174 CYP7A1P22680 504 aa28.09■■■□□ 2.09
SSBP2-203ENST00000504174 CCDC8Q9H0W5 538 aaPredicted RBP28.09■■■□□ 2.09
SSBP2-203ENST00000504174 PIH1D3Q9NQM4 214 aaKnown RBP28.09■■■□□ 2.09
SSBP2-203ENST00000504174 DBNLQ9UJU6 430 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms