RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 INCENPQ9NQS7 918 aa18.33■□□□□ 0.52
YIPF3-212ENST00000503972 PI4KBQ9UBF8 816 aa18.33■□□□□ 0.52
YIPF3-212ENST00000503972 NEDD4P46934 1319 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
YIPF3-212ENST00000503972 GABPAQ06546 454 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 TRDNQ13061 729 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 C16orf86Q6ZW13 317 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
YIPF3-212ENST00000503972 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 TMEM39BQ9GZU3 492 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 EHD4Q9H223 541 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 CNNM2Q9H8M5 875 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 ZSWIM6Q9HCJ5 1215 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 PGAP2Q9UHJ9 254 aa18.32■□□□□ 0.52
YIPF3-212ENST00000503972 SCAF8Q9UPN6 1271 aaKnown RBP18.32■□□□□ 0.52
YIPF3-212ENST00000503972 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
YIPF3-212ENST00000503972 RBM19Q9Y4C8 960 aaKnown RBP18.32■□□□□ 0.52
YIPF3-212ENST00000503972 HMGB1P09429 215 aaKnown RBP18.31■□□□□ 0.52
YIPF3-212ENST00000503972 PDE4BQ07343 736 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 BLOC1S2Q6QNY1 142 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
YIPF3-212ENST00000503972 ZC3H15Q8WU90 426 aaKnown RBP18.31■□□□□ 0.52
YIPF3-212ENST00000503972 KRT23Q9C075 422 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
YIPF3-212ENST00000503972 ORC4O43929 436 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 CPA1P15085 419 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 COL9A3Q14050 684 aaPredicted RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 RALYLQ86SE5 291 aaKnown RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 METTL16Q86W50 562 aaKnown RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 DCPSQ96C86 337 aaKnown RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 CSRNP1Q96S65 589 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
YIPF3-212ENST00000503972 ZNF287Q9HBT7 754 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
YIPF3-212ENST00000503972 SIPA1L1O43166 1804 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 B4E1Z4 1266 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 PRDM1O75626 825 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 RPS6KB1P23443 525 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 CDK8P49336 464 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 EAPPQ56P03 285 aaPredicted RBP18.29■□□□□ 0.52
YIPF3-212ENST00000503972 RRP12Q5JTH9 1297 aaKnown RBP18.29■□□□□ 0.52
YIPF3-212ENST00000503972 DHX32Q7L7V1 743 aaKnown RBP18.29■□□□□ 0.52
YIPF3-212ENST00000503972 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 SLC44A5Q8NCS7 719 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 NKX2-3Q8TAU0 364 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 MKNK2Q9HBH9 465 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 SWAP70Q9UH65 585 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 PPP2R3BQ9Y5P8 575 aa18.29■□□□□ 0.52
YIPF3-212ENST00000503972 NT5C2P49902 561 aa18.28■□□□□ 0.52
YIPF3-212ENST00000503972 NEK4P51957 841 aa18.28■□□□□ 0.52
YIPF3-212ENST00000503972 CRACR2BQ8N4Y2 399 aaPredicted RBP18.28■□□□□ 0.52
YIPF3-212ENST00000503972 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
YIPF3-212ENST00000503972 ESR2Q92731 530 aa18.28■□□□□ 0.52
YIPF3-212ENST00000503972 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
YIPF3-212ENST00000503972 KDM4AO75164 1064 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 SLURP2P0DP57 97 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 RASA1P20936 1047 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 MCM5P33992 734 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 EXOSC10Q01780 885 aaKnown RBP18.27■□□□□ 0.52
YIPF3-212ENST00000503972 CYB5R4Q7L1T6 521 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 TRIM34Q9BYJ4 488 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 ZSWIM5Q9P217 1185 aa18.27■□□□□ 0.52
YIPF3-212ENST00000503972 HERC5Q9UII4 1024 aaKnown RBP18.27■□□□□ 0.52
YIPF3-212ENST00000503972 WDR19Q8NEZ3 1342 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 TBC1D12O60347 775 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 RANBP6O60518 1105 aaKnown RBP18.26■□□□□ 0.51
YIPF3-212ENST00000503972 SHMT1P34896 483 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 ANTXR2P58335 489 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 SULF1Q8IWU6 871 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
YIPF3-212ENST00000503972 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
YIPF3-212ENST00000503972 TTC14Q96N46 770 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
YIPF3-212ENST00000503972 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
YIPF3-212ENST00000503972 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 PRC1O43663 620 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 ST18O60284 1047 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 MAP3K10Q02779 954 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-212ENST00000503972 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 TCEANC2Q96MN5 208 aa18.25■□□□□ 0.51
YIPF3-212ENST00000503972 ALDH8A1Q9H2A2 487 aaPredicted RBP18.25■□□□□ 0.51
YIPF3-212ENST00000503972 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 ADM5C9JUS6 153 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 TFAP4Q01664 338 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 PRAMEF18Q5VWM3 479 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 HOOK2Q96ED9 719 aa18.24■□□□□ 0.51
YIPF3-212ENST00000503972 MTA3Q9BTC8 594 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms