RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC144CPQ8IYA2 1237 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 CLSTN2Q9H4D0 955 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 GJB4Q9NTQ9 266 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
USP46-204ENST00000503060 TRIM37O94972 964 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
USP46-204ENST00000503060 ZKSCAN3Q9BRR0 538 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 TNMDQ9H2S6 317 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 MAST2Q6P0Q8 1798 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 ERICH2A1L162 156 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
USP46-204ENST00000503060 ESPNB1AK53 854 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 NR1I2O75469 434 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 SERPINB2P05120 415 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 PRDX5P30044 214 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 IARSP41252 1262 aaKnown RBP13.42□□□□□ -0.26
USP46-204ENST00000503060 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
USP46-204ENST00000503060 CAMK4Q16566 473 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 SLC51AQ86UW1 340 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
USP46-204ENST00000503060 PHKBQ93100 1093 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 XDHP47989 1333 aa13.42□□□□□ -0.26
USP46-204ENST00000503060 KIF28PB7ZC32 967 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
USP46-204ENST00000503060 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 ST5P78524 1137 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 RBM43Q6ZSC3 357 aaKnown RBP13.41□□□□□ -0.26
USP46-204ENST00000503060 ESR2Q92731 530 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP46-204ENST00000503060 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 SMIM22K7EJ46 135 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
USP46-204ENST00000503060 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
USP46-204ENST00000503060 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 ERCC3P19447 782 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 MKRN3Q13064 507 aaKnown RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 SEMA3FQ13275 785 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 HS1BP3Q53T59 392 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 CRNKL1Q9BZJ0 848 aaKnown RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 AATFQ9NY61 560 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP46-204ENST00000503060 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 DUOX1Q9NRD9 1551 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 FMNL1O95466 1100 aaPredicted RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 IFNAR1P17181 557 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 RCAN1P53805 252 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 SEC23AQ15436 765 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 RTN1Q16799 776 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 KRT40Q6A162 431 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 CTR9Q6PD62 1173 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 C15orf52Q6ZUT6 534 aaKnown RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 CKAP2LQ8IYA6 745 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
USP46-204ENST00000503060 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
USP46-204ENST00000503060 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 YEATS4O95619 227 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 FGRP09769 529 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 PCP11498 1178 aaKnown RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 ME1P48163 572 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 TYRO3Q06418 890 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 CLIC4Q9Y696 253 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 TNKSO95271 1327 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 USP17L21D6R901 530 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 GPSM2P81274 684 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 DDR1Q08345 913 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 FOXD4Q12950 439 aaPredicted RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 STK38Q15208 465 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 CCDC73Q6ZRK6 1079 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 ZNF804AQ7Z570 1209 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 DCP1AQ9NPI6 582 aaPredicted RBP13.39□□□□□ -0.27
USP46-204ENST00000503060 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
USP46-204ENST00000503060 IRF5Q13568 498 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 TXNRD1Q16881 649 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 SDR16C5Q8N3Y7 309 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 KCNG4Q8TDN1 519 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 WASF1Q92558 559 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
USP46-204ENST00000503060 RPS6KL1Q9Y6S9 549 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms