RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
CLIP1-204ENST00000501271 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 CUTAO60888 179 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 TOB1P50616 345 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-204ENST00000501271 PPARAQ07869 468 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
CLIP1-204ENST00000501271 CYP7A1P22680 504 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
CLIP1-204ENST00000501271 GYG1P46976 350 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 GSDMDP57764 484 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 SART3Q15020 963 aaKnown RBP11.37□□□□□ -0.59
CLIP1-204ENST00000501271 LONRF3Q496Y0 759 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 SPECC1Q5M775 1068 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 WASF1Q92558 559 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
CLIP1-204ENST00000501271 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 IKBKBO14920 756 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 GRIN1Q05586 938 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 KCNH3Q9ULD8 1083 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 MYH13Q9UKX3 1938 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ERICH2A1L162 156 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 FOXN1O15353 648 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 TPM4P67936 248 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 NR5A1Q13285 461 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 KRBA2Q6ZNG9 492 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 CCAR2Q8N163 923 aaKnown RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 CRACR2BQ8N4Y2 399 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 ANKRD7Q92527 254 aa11.36□□□□□ -0.59
CLIP1-204ENST00000501271 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
CLIP1-204ENST00000501271 TNKSO95271 1327 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 KCNQ2O43526 872 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 DEXIO95424 95 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 FANCCQ00597 558 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 SEC23AQ15436 765 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 FANCBQ8NB91 859 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 CDC5LQ99459 802 aaKnown RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 RAI14Q9P0K7 980 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 PAXBP1Q9Y5B6 917 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 NCBP1Q09161 790 aaKnown RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 CNNM3Q8NE01 707 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 SHISA4Q96DD7 197 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 RIOK1Q9BRS2 568 aaKnown RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
CLIP1-204ENST00000501271 FOXP1Q9H334 677 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 FBXO2Q9UK22 296 aaPredicted RBP11.35□□□□□ -0.59
CLIP1-204ENST00000501271 CYP2D7A0A087X1C5 515 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 BMP6P22004 513 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 PTPN14Q15678 1187 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 CCDC150Q8NCX0 1101 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 CCDC112Q8NEF3 446 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 ZNF384Q8TF68 577 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 DPF2Q92785 391 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 ANAPC4Q9UJX5 808 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 PCDHB6Q9Y5E3 794 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 PCDHA5Q9Y5H7 936 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 RCAN1P53805 252 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
CLIP1-204ENST00000501271 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-204ENST00000501271 MYL5Q02045 173 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
CLIP1-204ENST00000501271 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
CLIP1-204ENST00000501271 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLIP1-204ENST00000501271 PTPREP23469 700 aa11.33□□□□□ -0.6
CLIP1-204ENST00000501271 PDE4BQ07343 736 aa11.33□□□□□ -0.6
CLIP1-204ENST00000501271 NAA30Q147X3 362 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-204ENST00000501271 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-204ENST00000501271 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
CLIP1-204ENST00000501271 ESR2Q92731 530 aa11.33□□□□□ -0.6
CLIP1-204ENST00000501271 ZNF831Q5JPB2 1677 aa11.33□□□□□ -0.6
CLIP1-204ENST00000501271 LAMB1P07942 1786 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms