RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ERCC5P28715 1186 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 PARP10Q53GL7 1025 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 TMC6Q7Z403 805 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 FUT2Q10981 343 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 FOXP4Q8IVH2 680 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 AATFQ9NY61 560 aaKnown RBP eCLIP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 KCNH3Q9ULD8 1083 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 B4E1Z4 1266 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 ARHGAP6O43182 974 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 GTF2E1P29083 439 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 PBX1P40424 430 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 FOSBP53539 338 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 MAP3K12Q12852 859 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 RASGRF1Q13972 1273 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 CRACR2BQ8N4Y2 399 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 RNF41Q9H4P4 317 aaPredicted RBP8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 DNAI1Q9UI46 699 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 DENND2AQ9ULE3 1009 aa8.3□□□□□ -1.08
LYSMD3-203ENST00000500869 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 BMP15O95972 392 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 SEMA3FQ13275 785 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 UBXN6Q9BZV1 441 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 CNNM1Q9NRU3 951 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 GJB4Q9NTQ9 266 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 ZSWIM5Q9P217 1185 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 MAN1B1Q9UKM7 699 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 CEP131Q9UPN4 1083 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 A0A087WWV3 80 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 STX10O60499 249 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 TRIM29Q14134 588 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 ZRSR1Q15695 479 aaKnown RBP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 APTXQ7Z2E3 356 aaKnown RBP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 FILIP1Q7Z7B0 1213 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 AIFM3Q96NN9 605 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 ITIH6Q6UXX5 1313 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 SLC12A7Q9Y666 1083 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 MYH1P12882 1939 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 A0A1B0GTH6 734 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 ZRANB2O95218 330 aaKnown RBP eCLIP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 SMC2O95347 1197 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 PLCD1P51178 756 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 PNOCQ13519 176 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 POSTNQ15063 836 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 MSL3Q8N5Y2 521 aaKnown RBP8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 DPF2Q92785 391 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 PHF20Q9BVI0 1012 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 BRIP1Q9BX63 1249 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 ZBTB1Q9Y2K1 713 aa8.29□□□□□ -1.08
LYSMD3-203ENST00000500869 FOCADQ5VW36 1801 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 ZSCAN12O43309 604 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NTSR2O95665 410 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 TPM1P09493 284 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 FBXO38Q6PIJ6 1188 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PANX2Q96RD6 677 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PCDHA5Q9Y5H7 936 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 CDK5RAP2Q96SN8 1893 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 VWA3AA6NCI4 1184 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 FANCGO15287 622 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 TADA3O75528 432 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 CAMTA2O94983 1202 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 MBD4O95243 580 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 ATP1A3P13637 1013 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 UBASH3AP57075 661 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PDE4BQ07343 736 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 RTN1Q16799 776 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 SYNE4Q8N205 404 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NAA15Q9BXJ9 866 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NAPBQ9H115 298 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 CCDC9Q9Y3X0 531 aaKnown RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 CUL4BQ13620 913 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 NR1I3Q14994 352 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 KRT222Q8N1A0 295 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 PHKBQ93100 1093 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 SHISA4Q96DD7 197 aa8.28□□□□□ -1.08
LYSMD3-203ENST00000500869 MED15Q96RN5 788 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms