RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 WAPLQ7Z5K2 1190 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 TRIM42Q8IWZ5 723 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 CACTIN-AS1Q8N1I8 211 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 DBNDD2Q9BQY9 259 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 TRIM33Q9UPN9 1127 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 USP20Q9Y2K6 914 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-208ENST00000498325 ARHGEF10O15013 1369 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 NPC1L1Q9UHC9 1359 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 HMX2A2RU54 273 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 PRR19A6NJB7 356 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 GRIN3BO60391 1043 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 MMP20O60882 483 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 UVSSAQ2YD98 709 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 C11orf91Q3C1V1 193 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 GALNT11Q8NCW6 608 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 ADGRE2Q9UHX3 823 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 TNS2Q63HR2 1409 aa7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 BRD4O60885 1362 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-208ENST00000498325 KNDC1Q76NI1 1749 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 RAD21O60216 631 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 WISP1O95388 367 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 SOX18P35713 384 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 CHRNA2Q15822 529 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 NLRP13Q86W25 1043 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 CMTR1Q8N1G2 835 aaKnown RBP7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 TERF2IPQ9NYB0 399 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 PLEKHH1Q9ULM0 1364 aa7.07□□□□□ -1.28
HMGXB4-208ENST00000498325 RGPD3A6NKT7 1758 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 RGPD4Q7Z3J3 1758 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 LINC01387J3KSC0 135 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 OPLAHO14841 1288 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 CD68P34810 354 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 LARP1Q6PKG0 1096 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 RGL4Q8IZJ4 473 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 FAM9BQ8IZU0 186 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 FAM46AQ96IP4 442 aaKnown RBP7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 SLC12A5Q9H2X9 1139 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 TULP4Q9NRJ4 1543 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 KIF1AQ12756 1690 aa7.06□□□□□ -1.28
HMGXB4-208ENST00000498325 JAG1P78504 1218 aa7.05□□□□□ -1.28
HMGXB4-208ENST00000498325 CCDC184Q52MB2 194 aa7.05□□□□□ -1.28
HMGXB4-208ENST00000498325 MYRFLQ96LU7 910 aa7.05□□□□□ -1.28
HMGXB4-208ENST00000498325 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
HMGXB4-208ENST00000498325 ANKRD36BQ8N2N9 1353 aa7.05□□□□□ -1.28
HMGXB4-208ENST00000498325 PEAK1Q9H792 1746 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 CGNL1Q0VF96 1302 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 PCNTO95613 3336 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 TOMM70O94826 608 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 HSPA1AP0DMV8 641 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 HSPA1BP0DMV9 641 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 HNRNPUQ00839 825 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 CLEC10AQ8IUN9 316 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 SHKBP1Q8TBC3 707 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 VTI1AQ96AJ9 217 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 MYO19Q96H55 970 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 KCNK4Q9NYG8 393 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 NSD2O96028 1365 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 AATKQ6ZMQ8 1374 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 KIAA0232Q92628 1395 aa7.04□□□□□ -1.28
HMGXB4-208ENST00000498325 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 PPP2R1AP30153 589 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 DPYDQ12882 1025 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 ZNF827Q17R98 1081 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 TXNDC11Q6PKC3 985 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 ERICH6Q7L0X2 663 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 MORC1Q86VD1 984 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 TCP11L2Q8N4U5 519 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 PMFBP1Q8TBY8 1022 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 WDR90Q96KV7 1748 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 FMN2Q9NZ56 1722 aa7.03□□□□□ -1.28
HMGXB4-208ENST00000498325 OVOS2A0A0G2JMS6 1433 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 OVOS2A0A0J9YW53 1432 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 OVOS2Q6IE36 1432 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 NSD3Q9BZ95 1437 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 DUOXA2Q1HG44 320 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 OGFOD2Q6N063 350 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 KIAA1211Q6ZU35 1233 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 TREML1Q86YW5 311 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 NUDT16Q96DE0 195 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 LACRTQ9GZZ8 138 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 KCNF1Q9H3M0 494 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
HMGXB4-208ENST00000498325 ATP7BP35670 1465 aa7.01□□□□□ -1.29
HMGXB4-208ENST00000498325 TM4SF5O14894 197 aa7.01□□□□□ -1.29
HMGXB4-208ENST00000498325 SART1O43290 800 aaKnown RBP7.01□□□□□ -1.29
HMGXB4-208ENST00000498325 CDC25BP30305 580 aa7.01□□□□□ -1.29
HMGXB4-208ENST00000498325 EVA1CP58658 441 aa7.01□□□□□ -1.29
HMGXB4-208ENST00000498325 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms