RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 NBPF11Q86T75 865 aa27.67■■■□□ 2.02
CDKN2A-208ENST00000498124 TEX11Q8IYF3 940 aa27.67■■■□□ 2.02
CDKN2A-208ENST00000498124 SRRDQ9UH36 339 aa27.67■■■□□ 2.02
CDKN2A-208ENST00000498124 LOC285556D6RIA3 1793 aa27.67■■■□□ 2.02
CDKN2A-208ENST00000498124 MGAMO43451 1857 aa27.66■■■□□ 2.02
CDKN2A-208ENST00000498124 OSBPP22059 807 aa27.66■■■□□ 2.02
CDKN2A-208ENST00000498124 CCDC158Q5M9N0 1113 aa27.66■■■□□ 2.02
CDKN2A-208ENST00000498124 SLC45A1Q9Y2W3 748 aa27.66■■■□□ 2.02
CDKN2A-208ENST00000498124 TRIM75PA6NK02 468 aa27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 NAA16Q6N069 864 aaPredicted RBP27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 GADL1Q6ZQY3 521 aa27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 EAF2Q96CJ1 260 aaPredicted RBP27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 PIH1D3Q9NQM4 214 aaKnown RBP27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 AATFQ9NY61 560 aaKnown RBP eCLIP27.65■■■□□ 2.02
CDKN2A-208ENST00000498124 MYCP01106 439 aaPredicted RBP27.64■■■□□ 2.02
CDKN2A-208ENST00000498124 ZAP70P43403 619 aa27.64■■■□□ 2.02
CDKN2A-208ENST00000498124 PANK1Q8TE04 598 aa27.64■■■□□ 2.02
CDKN2A-208ENST00000498124 TMEM106CQ9BVX2 250 aa27.64■■■□□ 2.02
CDKN2A-208ENST00000498124 PPP4CP60510 307 aa27.63■■■□□ 2.01
CDKN2A-208ENST00000498124 CCDC8Q9H0W5 538 aaPredicted RBP27.63■■■□□ 2.01
CDKN2A-208ENST00000498124 FMNL1O95466 1100 aaPredicted RBP27.62■■■□□ 2.01
CDKN2A-208ENST00000498124 FLT1P17948 1338 aa27.62■■■□□ 2.01
CDKN2A-208ENST00000498124 MYPNQ86TC9 1320 aa27.62■■■□□ 2.01
CDKN2A-208ENST00000498124 PDE3AQ14432 1141 aa27.61■■■□□ 2.01
CDKN2A-208ENST00000498124 TREML2Q5T2D2 321 aa27.61■■■□□ 2.01
CDKN2A-208ENST00000498124 AGTPBP1Q9UPW5 1226 aa27.61■■■□□ 2.01
CDKN2A-208ENST00000498124 CAP2P40123 477 aa27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 PRKCZQ05513 592 aa27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 SLC4A8Q2Y0W8 1093 aa27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 NOL10Q9BSC4 688 aaKnown RBP27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 DNAJC18Q9H819 358 aa27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 HERC5Q9UII4 1024 aaKnown RBP27.6■■■□□ 2.01
CDKN2A-208ENST00000498124 BAG3O95817 575 aa27.59■■■□□ 2.01
CDKN2A-208ENST00000498124 FCGRTP55899 365 aa27.59■■■□□ 2.01
CDKN2A-208ENST00000498124 MTFR1Q15390 333 aa27.59■■■□□ 2.01
CDKN2A-208ENST00000498124 MAPKAPK5Q8IW41 473 aa27.59■■■□□ 2.01
CDKN2A-208ENST00000498124 EXOC6BQ9Y2D4 811 aa27.59■■■□□ 2.01
CDKN2A-208ENST00000498124 IGSF3O75054 1194 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 PLCG2P16885 1265 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 HOXD10P28358 340 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 RRP1P56182 461 aaKnown RBP27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 SPP2Q13103 211 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 METTL16Q86W50 562 aaKnown RBP27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 ZNF280CQ8ND82 737 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 TGFBRAP1Q8WUH2 860 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 PI4KBQ9UBF8 816 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 NDUFB9Q9Y6M9 179 aa27.58■■■□□ 2.01
CDKN2A-208ENST00000498124 JAG1P78504 1218 aa27.57■■■□□ 2
CDKN2A-208ENST00000498124 PROCA1Q8NCQ7 364 aaPredicted RBP27.57■■■□□ 2
CDKN2A-208ENST00000498124 RAET1EQ8TD07 263 aa27.57■■■□□ 2
CDKN2A-208ENST00000498124 SHISA4Q96DD7 197 aa27.57■■■□□ 2
CDKN2A-208ENST00000498124 DHX36Q9H2U1 1008 aaKnown RBP27.57■■■□□ 2
CDKN2A-208ENST00000498124 GABRQQ9UN88 632 aa27.57■■■□□ 2
CDKN2A-208ENST00000498124 GRK4P32298 578 aa27.56■■■□□ 2
CDKN2A-208ENST00000498124 DYNLL1P63167 89 aaKnown RBP27.56■■■□□ 2
CDKN2A-208ENST00000498124 SHROOM1Q2M3G4 852 aaPredicted RBP27.56■■■□□ 2
CDKN2A-208ENST00000498124 SMCR8Q8TEV9 937 aaPredicted RBP27.55■■■□□ 2
CDKN2A-208ENST00000498124 TBC1D2Q9BYX2 928 aa27.55■■■□□ 2
CDKN2A-208ENST00000498124 USP17L5A8MUK1 530 aa27.54■■■□□ 2
CDKN2A-208ENST00000498124 HMGCS2P54868 508 aa27.54■■■□□ 2
CDKN2A-208ENST00000498124 ANTXR1Q9H6X2 564 aa27.54■■■□□ 2
CDKN2A-208ENST00000498124 PALD1Q9ULE6 856 aa27.54■■■□□ 2
CDKN2A-208ENST00000498124 CYP7A1P22680 504 aa27.53■■■□□ 2
CDKN2A-208ENST00000498124 SH3D19Q5HYK7 790 aa27.53■■■□□ 2
CDKN2A-208ENST00000498124 AACSQ86V21 672 aa27.53■■■□□ 2
CDKN2A-208ENST00000498124 CHMP4BQ9H444 224 aaKnown RBP27.53■■■□□ 2
CDKN2A-208ENST00000498124 DDX19BQ9UMR2 479 aa27.53■■■□□ 2
CDKN2A-208ENST00000498124 COG6Q9Y2V7 657 aa27.53■■■□□ 2
CDKN2A-208ENST00000498124 DDX60LQ5H9U9 1706 aaKnown RBP27.53■■■□□ 2
CDKN2A-208ENST00000498124 IDH1O75874 414 aaKnown RBP27.52■■■□□ 2
CDKN2A-208ENST00000498124 ERC1Q8IUD2 1116 aa27.52■■■□□ 2
CDKN2A-208ENST00000498124 ANKRD13CQ8N6S4 541 aa27.52■■■□□ 2
CDKN2A-208ENST00000498124 WDR18Q9BV38 432 aa27.52■■■□□ 2
CDKN2A-208ENST00000498124 SAP30BPQ9UHR5 308 aaKnown RBP27.52■■■□□ 2
CDKN2A-208ENST00000498124 PNMA3Q9UL41 463 aa27.52■■■□□ 2
CDKN2A-208ENST00000498124 FAM110CQ1W6H9 321 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 C20orf194Q5TEA3 1177 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 MAGEB6Q8N7X4 407 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 MIGA1Q8NAN2 632 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 SLAIN1Q8ND83 568 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 MYH1P12882 1939 aa27.51■■□□□ 1.99
CDKN2A-208ENST00000498124 DOCK3Q8IZD9 2030 aa27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 CCL5P13501 91 aa27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 FLT3LGP49771 235 aa27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 FOXP4Q8IVH2 680 aaPredicted RBP27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 SIRT2Q8IXJ6 389 aa27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 IL1RAPL2Q9NP60 686 aa27.5■■□□□ 1.99
CDKN2A-208ENST00000498124 TNPO2O14787 897 aaKnown RBP27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 GDF11O95390 407 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 ASNSP08243 561 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 MTMR2Q13614 643 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 RHPN1Q8TCX5 695 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 ASCC2Q9H1I8 757 aaPredicted RBP27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 AS3MTQ9HBK9 375 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 CEP290O15078 2479 aa27.49■■□□□ 1.99
CDKN2A-208ENST00000498124 IRF5Q13568 498 aa27.48■■□□□ 1.99
CDKN2A-208ENST00000498124 CRACR2BQ8N4Y2 399 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-208ENST00000498124 ZBTB40Q9NUA8 1239 aa27.48■■□□□ 1.99
CDKN2A-208ENST00000498124 ZBTB21Q9ULJ3 1066 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms