RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 AMOTL1Q8IY63 956 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 SUPT20HQ8NEM7 779 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 LMBRD1Q9NUN5 540 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 FLT1P17948 1338 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 MYH1P12882 1939 aa20.85■□□□□ 0.93
CHRNA4-206ENST00000498043 GOLGA8AA7E2F4 631 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 PRPF40AO75400 957 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 ECM29Q5VYK3 1845 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 ROBO3Q96MS0 1386 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 H3BQV1 296 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 ORC4O43929 436 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 PDE4BQ07343 736 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 IFFO2Q5TF58 517 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 DYNLL2Q96FJ2 89 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 MTA3Q9BTC8 594 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 GDPD2Q9HCC8 539 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 KIF3AQ9Y496 699 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 ATP6V1DQ9Y5K8 247 aa20.84■□□□□ 0.93
CHRNA4-206ENST00000498043 STRIP1Q5VSL9 837 aa20.83■□□□□ 0.93
CHRNA4-206ENST00000498043 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.93
CHRNA4-206ENST00000498043 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 CDC27P30260 824 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 ADD1P35611 737 aaKnown RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 SEC23AQ15436 765 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 FAM47AQ5JRC9 791 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 DACT2Q5SW24 774 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 ENAHQ8N8S7 591 aaPredicted RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 GZF1Q9H116 711 aaPredicted RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 PPP1R1BQ9UD71 204 aaPredicted RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 FDPSP14324 419 aaKnown RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 NCLP19338 710 aaKnown RBP20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 SYNE3Q6ZMZ3 975 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 IQCA1Q86XH1 822 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 CNPY2Q9Y2B0 182 aa20.82■□□□□ 0.92
CHRNA4-206ENST00000498043 BRCA1P38398 1863 aaKnown RBP20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 USP17L3A6NCW0 530 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 USP17L4A6NCW7 530 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 PLCD1P51178 756 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 USP17L1Q7RTZ2 530 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 RTKN2Q8IZC4 609 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 TEKT1Q969V4 418 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 PSME4Q14997 1843 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 PICALMQ13492 652 aa20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 SKOR2Q2VWA4 1001 aaPredicted RBP20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 DDX49Q9Y6V7 483 aaKnown RBP20.81■□□□□ 0.92
CHRNA4-206ENST00000498043 COL4A5P29400 1685 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 TSPY2A6NKD2 308 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 NMT2O60551 498 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 DNM1Q05193 864 aaKnown RBP20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 ZNF654Q8IZM8 581 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 SLC44A5Q8NCS7 719 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 UPF1Q92900 1129 aaKnown RBP eCLIP20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 ZNF277Q9NRM2 450 aaPredicted RBP20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 ORC3Q9UBD5 711 aaPredicted RBP20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 NID2Q14112 1375 aa20.8■□□□□ 0.92
CHRNA4-206ENST00000498043 PSDA5PKW4 1024 aaPredicted RBP20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 YDJCA8MPS7 323 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 TGFB2P61812 414 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 GSE1Q14687 1217 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 GRIPAP1Q4V328 841 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 TMTC2Q8N394 836 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 PSMD1Q99460 953 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 FAM217BQ9NTX9 383 aaPredicted RBP20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 FIBPO43427 364 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 CRKP46108 304 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 FKBP1AP62942 108 aaKnown RBP20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 GUCY1B3Q02153 619 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 FAM173BQ6P4H8 233 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 HHIPL2Q6UWX4 724 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 PHKBQ93100 1093 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 PIM2Q9P1W9 311 aa20.79■□□□□ 0.92
CHRNA4-206ENST00000498043 CDKL5O76039 1030 aa20.78■□□□□ 0.92
CHRNA4-206ENST00000498043 CPLX2Q6PUV4 134 aaKnown RBP20.78■□□□□ 0.92
CHRNA4-206ENST00000498043 MKNK2Q9HBH9 465 aa20.78■□□□□ 0.92
CHRNA4-206ENST00000498043 USP40Q9NVE5 1235 aa20.78■□□□□ 0.92
CHRNA4-206ENST00000498043 MYH15Q9Y2K3 1946 aa20.78■□□□□ 0.92
CHRNA4-206ENST00000498043 RTN1Q16799 776 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 PCDHAC2Q9Y5I4 1007 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 WDHD1O75717 1129 aaPredicted RBP20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 RESTQ13127 1097 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 KLHL40Q2TBA0 621 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 APOBEC3HQ6NTF7 200 aaKnown RBP20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 USP48Q86UV5 1035 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 LARGE2Q8N3Y3 721 aa20.77■□□□□ 0.92
CHRNA4-206ENST00000498043 TFAP4Q01664 338 aa20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 NTRK3Q16288 839 aa20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 RBM5P52756 815 aaKnown RBP eCLIP20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 GPT2Q8TD30 523 aa20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
CHRNA4-206ENST00000498043 ZDHHC15Q96MV8 337 aa20.76■□□□□ 0.91
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