RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FBXO24O75426 580 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 BRD1O95696 1058 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 FMR1Q06787 632 aaKnown RBP eCLIP7.81□□□□□ -1.165e-7■□□□□ 11.2
SMC4-227ENST00000497984 ZBTB37Q5TC79 503 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 ANGEL2Q5VTE6 544 aaKnown RBP7.81□□□□□ -1.16
SMC4-227ENST00000497984 C12orf40Q86WS4 652 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 SPACA3Q8IXA5 215 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 CEP44Q9C0F1 390 aa7.81□□□□□ -1.16
SMC4-227ENST00000497984 FANCGO15287 622 aa7.8□□□□□ -1.16
SMC4-227ENST00000497984 NKPD1Q17RQ9 610 aa7.8□□□□□ -1.16
SMC4-227ENST00000497984 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
SMC4-227ENST00000497984 GTF2IRD1Q9UHL9 959 aa7.8□□□□□ -1.16
SMC4-227ENST00000497984 SAMM50Q9Y512 469 aa7.8□□□□□ -1.16
SMC4-227ENST00000497984 EOMESO95936 686 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 MAPK8P45983 427 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 LLGL2Q6P1M3 1020 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 FLAD1Q8NFF5 587 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 PRDM7Q9NQW5 492 aa7.79□□□□□ -1.16
SMC4-227ENST00000497984 SCARA3Q6AZY7 606 aa7.78□□□□□ -1.16
SMC4-227ENST00000497984 WWC3Q9ULE0 1092 aa7.78□□□□□ -1.16
SMC4-227ENST00000497984 PCDHA4Q9UN74 947 aa7.78□□□□□ -1.16
SMC4-227ENST00000497984 GIPC1O14908 333 aa7.77□□□□□ -1.17
SMC4-227ENST00000497984 ZNF124Q15973 351 aa7.77□□□□□ -1.17
SMC4-227ENST00000497984 ASB11Q8WXH4 323 aa7.77□□□□□ -1.17
SMC4-227ENST00000497984 FARP2O94887 1054 aaPredicted RBP7.76□□□□□ -1.17
SMC4-227ENST00000497984 CELA3AP09093 270 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 INPP5AQ14642 412 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 LRRC14Q15048 493 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 ALG1LQ6GMV1 187 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 CYP8B1Q9UNU6 501 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 PITPNM2Q9BZ72 1349 aa7.76□□□□□ -1.17
SMC4-227ENST00000497984 CLCN7P51798 805 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 ZP2Q05996 745 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
SMC4-227ENST00000497984 IKZF1Q13422 519 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 PCNX4Q63HM2 1172 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
SMC4-227ENST00000497984 KCT2Q8NC54 265 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.172e-7■■■■□ 26.2
SMC4-227ENST00000497984 MAPK8IP1Q9UQF2 711 aa7.75□□□□□ -1.17
SMC4-227ENST00000497984 LRIG2O94898 1065 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 LRFN4Q6PJG9 635 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 CDC37L1Q7L3B6 337 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 ELMO3Q96BJ8 720 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 C12orf49Q9H741 205 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 FBRSQ9HAH7 460 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 PRDM5Q9NQX1 630 aaPredicted RBP7.74□□□□□ -1.17
SMC4-227ENST00000497984 CNTNAP4Q9C0A0 1308 aa7.74□□□□□ -1.17
SMC4-227ENST00000497984 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 SLITRK5O94991 958 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 MESP2Q0VG99 397 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 SLBPQ14493 270 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC4-227ENST00000497984 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 ZNF507Q8TCN5 953 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 GAL3ST3Q96A11 431 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 FAM8A1Q9UBU6 413 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 CTNND2Q9UQB3 1225 aa7.73□□□□□ -1.17
SMC4-227ENST00000497984 ZNF503-AS2A6NEH8 195 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 DBX1A6NMT0 343 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 USP17L7P0C7H9 530 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 C22orf34Q6ZV56 151 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 ZSWIM9Q86XI8 627 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 PLPPR2Q96GM1 343 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 FOXQ1Q9C009 403 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 SEMA3GQ9NS98 782 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
SMC4-227ENST00000497984 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.71□□□□□ -1.18
SMC4-227ENST00000497984 CAP2P40123 477 aa7.71□□□□□ -1.18
SMC4-227ENST00000497984 NKG7Q16617 165 aa7.71□□□□□ -1.18
SMC4-227ENST00000497984 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
SMC4-227ENST00000497984 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
SMC4-227ENST00000497984 LMCD1Q9NZU5 365 aa7.71□□□□□ -1.18
SMC4-227ENST00000497984 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
SMC4-227ENST00000497984 PRAMEF27A3QJZ7 478 aa7.7□□□□□ -1.18
SMC4-227ENST00000497984 P4HBP07237 508 aaKnown RBP7.7□□□□□ -1.18
SMC4-227ENST00000497984 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
SMC4-227ENST00000497984 CDK8P49336 464 aa7.7□□□□□ -1.18
SMC4-227ENST00000497984 ATP2B2Q01814 1243 aa7.7□□□□□ -1.18
SMC4-227ENST00000497984 FYB2Q5VWT5 728 aa7.7□□□□□ -1.18
SMC4-227ENST00000497984 SV2BQ7L1I2 683 aa7.7□□□□□ -1.18
SMC4-227ENST00000497984 KCNMB1Q16558 191 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 HDXQ7Z353 690 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 HSPA12BQ96MM6 686 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 MIPEPQ99797 713 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 ATP13A1Q9HD20 1204 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
SMC4-227ENST00000497984 LRRC10BA6NIK2 292 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 RBAK-RBAKDNI3L0D1 243 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
SMC4-227ENST00000497984 SFRP5Q5T4F7 317 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 RIN3Q8TB24 985 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 FAM84AQ96KN4 292 aa7.68□□□□□ -1.18
SMC4-227ENST00000497984 CARS2Q9HA77 564 aaKnown RBP7.68□□□□□ -1.18
SMC4-227ENST00000497984 SNCAIPQ9Y6H5 919 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms