RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 SNX21Q969T3 373 aa28.72■■■□□ 2.19
TNFRSF4-203ENST00000497869 PDRG1Q9NUG6 133 aa28.72■■■□□ 2.19
TNFRSF4-203ENST00000497869 PGAP2Q9UHJ9 254 aa28.72■■■□□ 2.19
TNFRSF4-203ENST00000497869 LAMB1P07942 1786 aa28.71■■■□□ 2.19
TNFRSF4-203ENST00000497869 AK2P54819 239 aa28.71■■■□□ 2.19
TNFRSF4-203ENST00000497869 GABPAQ06546 454 aa28.71■■■□□ 2.19
TNFRSF4-203ENST00000497869 RRP12Q5JTH9 1297 aaKnown RBP28.7■■■□□ 2.19
TNFRSF4-203ENST00000497869 DPY19L2Q6NUT2 758 aa28.7■■■□□ 2.19
TNFRSF4-203ENST00000497869 ZSWIM5Q9P217 1185 aa28.7■■■□□ 2.19
TNFRSF4-203ENST00000497869 HACL1Q9UJ83 578 aa28.7■■■□□ 2.19
TNFRSF4-203ENST00000497869 POTECB2RU33 542 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 KDM4AO75164 1064 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 SLC4A3P48751 1232 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 TOB2Q14106 344 aaPredicted RBP28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 FKBP1CQ5VVH2 108 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 C16orf86Q6ZW13 317 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 DNAJC18Q9H819 358 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 ATRNL1Q5VV63 1379 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 TMEM39BQ9GZU3 492 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 TMOD2Q9NZR1 351 aa28.69■■■□□ 2.18
TNFRSF4-203ENST00000497869 MYO1BO43795 1136 aa28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 ORC4O43929 436 aa28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 RALYLQ86SE5 291 aaKnown RBP28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 FAM151AQ8WW52 585 aa28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 RNF41Q9H4P4 317 aaPredicted RBP28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 MYH1P12882 1939 aa28.68■■■□□ 2.18
TNFRSF4-203ENST00000497869 PRC1O43663 620 aa28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 HMGB1P09429 215 aaKnown RBP28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 CDK8P49336 464 aa28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 NOL8Q76FK4 1167 aaKnown RBP28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 TTC6Q86TZ1 520 aa28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 TOMM22Q9NS69 142 aa28.67■■■□□ 2.18
TNFRSF4-203ENST00000497869 SIPA1L1O43166 1804 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 FAM196BA6NMK8 535 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 ST18O60284 1047 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 TRDNQ13061 729 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 Q6ZUG5 572 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 AMOTL1Q8IY63 956 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 ADARB2Q9NS39 739 aaKnown RBP28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 LMOD1P29536 600 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 ANGEL2Q5VTE6 544 aaKnown RBP28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 FAM83AQ86UY5 434 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 KRT23Q9C075 422 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 ALDH8A1Q9H2A2 487 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 CNNM2Q9H8M5 875 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 SENP2Q9HC62 589 aa28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 COL2A1P02458 1487 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF4-203ENST00000497869 RASA1P20936 1047 aa28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 MCM5P33992 734 aa28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 RASA3Q14644 834 aa28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 FAM47AQ5JRC9 791 aa28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 ZSCAN29Q8IWY8 852 aaPredicted RBP28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 DHX36Q9H2U1 1008 aaKnown RBP28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 SERPINB13Q9UIV8 391 aa28.65■■■□□ 2.18
TNFRSF4-203ENST00000497869 PCP11498 1178 aaKnown RBP28.64■■■□□ 2.18
TNFRSF4-203ENST00000497869 TEPSINQ96N21 525 aa28.64■■■□□ 2.18
TNFRSF4-203ENST00000497869 ZKSCAN3Q9BRR0 538 aa28.64■■■□□ 2.18
TNFRSF4-203ENST00000497869 AGXT2Q9BYV1 514 aa28.64■■■□□ 2.18
TNFRSF4-203ENST00000497869 LARGE1O95461 756 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 SLC3A2P08195 630 aaKnown RBP28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 SHMT1P34896 483 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 PDE4BQ07343 736 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 METTL16Q86W50 562 aaKnown RBP28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 EHD4Q9H223 541 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 GGA3Q9NZ52 723 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 PI4KBQ9UBF8 816 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 RANBP6O60518 1105 aaKnown RBP28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 IGDCC4Q8TDY8 1250 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 IPO9Q96P70 1041 aaKnown RBP28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 TPCN1Q9ULQ1 816 aa28.63■■■□□ 2.17
TNFRSF4-203ENST00000497869 HLA-DOAP06340 250 aa28.62■■■□□ 2.17
TNFRSF4-203ENST00000497869 ESR2Q92731 530 aa28.62■■■□□ 2.17
TNFRSF4-203ENST00000497869 CSRNP1Q96S65 589 aa28.62■■■□□ 2.17
TNFRSF4-203ENST00000497869 WDR19Q8NEZ3 1342 aa28.61■■■□□ 2.17
TNFRSF4-203ENST00000497869 NMT2O60551 498 aa28.61■■■□□ 2.17
TNFRSF4-203ENST00000497869 BRF1Q92994 677 aa28.61■■■□□ 2.17
TNFRSF4-203ENST00000497869 MKNK2Q9HBH9 465 aa28.61■■■□□ 2.17
TNFRSF4-203ENST00000497869 EPHX2P34913 555 aa28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 RRP1BQ14684 758 aaKnown RBP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 SHROOM1Q2M3G4 852 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 DLK2Q6UY11 383 aa28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 FBXL16Q8N461 479 aa28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 DEFB129Q9H1M3 183 aa28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 K7ELQ4 463 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 SH2B2O14492 632 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 HSCBQ8IWL3 235 aa28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 TAF1DQ9H5J8 278 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF4-203ENST00000497869 TFAP4Q01664 338 aa28.59■■■□□ 2.17
TNFRSF4-203ENST00000497869 TMX3Q96JJ7 454 aa28.59■■■□□ 2.17
TNFRSF4-203ENST00000497869 IL17RBQ9NRM6 502 aa28.59■■■□□ 2.17
TNFRSF4-203ENST00000497869 ST3GAL1Q11201 340 aa28.58■■■□□ 2.17
TNFRSF4-203ENST00000497869 PRAMEF18Q5VWM3 479 aa28.58■■■□□ 2.17
TNFRSF4-203ENST00000497869 FOXP4Q8IVH2 680 aaPredicted RBP28.58■■■□□ 2.17
TNFRSF4-203ENST00000497869 LY9Q9HBG7 655 aa28.58■■■□□ 2.17
TNFRSF4-203ENST00000497869 BRPF3Q9ULD4 1205 aa28.58■■■□□ 2.17
TNFRSF4-203ENST00000497869 APOBRQ0VD83 1088 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 SEC23AQ15436 765 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 ME3Q16798 604 aa28.57■■■□□ 2.16
TNFRSF4-203ENST00000497869 AKR1B1P15121 316 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms