RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.74	□□□□□ -0.21
RNF25-206	ENST00000497832	EPG5	Q9HCE0	2579 aa		13.74	□□□□□ -0.21
RNF25-206	ENST00000497832	GRXCR1	A8MXD5	290 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	RGS2	P41220	211 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	RAB30	Q15771	203 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	CSPP1	Q1MSJ5	1256 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	CCDC129	Q6ZRS4	1044 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	ERMP1	Q7Z2K6	904 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	APBA2	Q99767	749 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	METTL22	Q9BUU2	404 aa	Predicted RBP	13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	CACNA1G	O43497	2377 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832		A0A0G2JMZ2	1700 aa		13.73	□□□□□ -0.21
RNF25-206	ENST00000497832	ATRNL1	Q5VV63	1379 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	UTY	O14607	1347 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	CLTB	P09497	229 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	RAG1	P15918	1043 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	POU3F3	P20264	500 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	MORN1	Q5T089	497 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	ARRDC4	Q8NCT1	418 aa		13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
RNF25-206	ENST00000497832	PKD1L2	Q7Z442	2459 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	TRIM75P	A6NK02	468 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	CSF1R	P07333	972 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	ALAD	P13716	330 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	TLE2	Q04725	743 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	SKIV2L	Q15477	1246 aa	Known RBP	13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	GJC2	Q5T442	439 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	MICALL1	Q8N3F8	863 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	PLA2G12B	Q9BX93	195 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	PHAX	Q9H814	394 aa	Known RBP	13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	MSRA	Q9UJ68	235 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	TIMELESS	Q9UNS1	1208 aa		13.71	□□□□□ -0.21
RNF25-206	ENST00000497832	KBTBD13	C9JR72	458 aa		13.7	□□□□□ -0.22
RNF25-206	ENST00000497832	CHL1	O00533	1208 aa		13.7	□□□□□ -0.22
RNF25-206	ENST00000497832	MAPK4	P31152	587 aa		13.7	□□□□□ -0.22
RNF25-206	ENST00000497832	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF25-206	ENST00000497832	SLC28A3	Q9HAS3	691 aa		13.7	□□□□□ -0.22
RNF25-206	ENST00000497832	IGKV5-2	P06315	115 aa		13.69	□□□□□ -0.22
RNF25-206	ENST00000497832	MFSD14C	Q5VZR4	134 aa		13.69	□□□□□ -0.22
RNF25-206	ENST00000497832	HHIPL2	Q6UWX4	724 aa		13.69	□□□□□ -0.22
RNF25-206	ENST00000497832	TBC1D22A	Q8WUA7	517 aa		13.69	□□□□□ -0.22
RNF25-206	ENST00000497832	HIBADH	P31937	336 aa	Known RBP	13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	MAP3K10	Q02779	954 aa		13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	CNGB1	Q14028	1251 aa	Predicted RBP	13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	NKX2-4	Q9H2Z4	354 aa		13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	MTCH2	Q9Y6C9	303 aa		13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	DMD	P11532	3685 aa		13.68	□□□□□ -0.22
RNF25-206	ENST00000497832	MAST3	O60307	1309 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832		H7C1W4	665 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	CTNND1	O60716	968 aa	Known RBP	13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	RGS20	O76081	388 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	CNGA1	P29973	690 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	ADCYAP1R1	P41586	468 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	TCP10	Q12799	353 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	TMEM240	Q5SV17	173 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	CCDC174	Q6PII3	467 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	C16orf59	Q7L2K0	433 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	GPR142	Q7Z601	462 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	GPRC5A	Q8NFJ5	357 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	HLA-C	Q95604	372 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	FAM84B	Q96KN1	310 aa	Predicted RBP	13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	FLRT1	Q9NZU1	646 aa		13.67	□□□□□ -0.22
RNF25-206	ENST00000497832	MAPK8IP3	Q9UPT6	1336 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	ANKRD18B	A2A2Z9	1011 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	GYG1	P46976	350 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	NFIA	Q12857	509 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	MAP2K5	Q13163	448 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	PLEKHH3	Q7Z736	793 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	GJD3	Q8N144	294 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	SUGT1	Q9Y2Z0	365 aa		13.66	□□□□□ -0.22
RNF25-206	ENST00000497832	GFRA3	O60609	400 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	KRT37	O76014	449 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	IGHA2	P01877	340 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	RIPK4	P57078	832 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	UBE3B	Q7Z3V4	1068 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	TRPV1	Q8NER1	839 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	EDC3	Q96F86	508 aa	Known RBP	13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	PNN	Q9H307	717 aa	Known RBP	13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	TXNRD2	Q9NNW7	524 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	TMEM39A	Q9NV64	488 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	FAM198A	Q9UFP1	575 aa		13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	YBX2	Q9Y2T7	364 aa	Known RBP	13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	LRRFIP2	Q9Y608	721 aa	Known RBP	13.65	□□□□□ -0.22
RNF25-206	ENST00000497832	ATAD5	Q96QE3	1844 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	BRWD1	Q9NSI6	2320 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	DDX58	O95786	925 aa	Known RBP	13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	TIMP1	P01033	207 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	CYBA	P13498	195 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	PTPN5	P54829	565 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	PPIG	Q13427	754 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	UBE4A	Q14139	1066 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	MFSD5	Q6N075	450 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	FAM178B	Q8IXR5	827 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	SLC44A5	Q8NCS7	719 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	FERMT2	Q96AC1	680 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	CHD6	Q8TD26	2715 aa		13.64	□□□□□ -0.23
RNF25-206	ENST00000497832	WDR87	Q6ZQQ6	2873 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms