RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 SPRYD3Q8NCJ5 442 aa23.54■■□□□ 1.36
ACTN4-208ENST00000497637 ZCCHC17Q9NP64 241 aaKnown RBP23.54■■□□□ 1.36
ACTN4-208ENST00000497637 CIZ1Q9ULV3 898 aaPredicted RBP23.54■■□□□ 1.36
ACTN4-208ENST00000497637 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
ACTN4-208ENST00000497637 SLC27A2O14975 620 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 TLR2O60603 784 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 CHGBP05060 677 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 GJB1P08034 283 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
ACTN4-208ENST00000497637 GJA8P48165 433 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 TSGA10IPQ3SY00 556 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 ZSCAN25Q6NSZ9 544 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 SEC62Q99442 399 aaKnown RBP23.53■■□□□ 1.36
ACTN4-208ENST00000497637 ELP3Q9H9T3 547 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 HMG20BQ9P0W2 317 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
ACTN4-208ENST00000497637 SNAP23O00161 211 aa23.52■■□□□ 1.36
ACTN4-208ENST00000497637 TNFAIP1Q13829 316 aa23.52■■□□□ 1.36
ACTN4-208ENST00000497637 TXNRD3Q86VQ6 643 aa23.52■■□□□ 1.36
ACTN4-208ENST00000497637 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.52■■□□□ 1.36
ACTN4-208ENST00000497637 ANKRD2Q9GZV1 360 aa23.52■■□□□ 1.36
ACTN4-208ENST00000497637 SPDYE2BA6NHP3 402 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 CYP2E1P05181 493 aaPredicted RBP23.51■■□□□ 1.35
ACTN4-208ENST00000497637 SPDYE6P0CI01 402 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 HOXD10P28358 340 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 RASA3Q14644 834 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 PI16Q6UXB8 463 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 CCDC129Q6ZRS4 1044 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 DSCC1Q9BVC3 393 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 VEZTQ9HBM0 779 aa23.51■■□□□ 1.35
ACTN4-208ENST00000497637 CLRN2A0PK11 232 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 MTFR1Q15390 333 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 FAM43AQ8N2R8 423 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 SPATA5Q8NB90 893 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 APPBP2Q92624 585 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 TTC14Q96N46 770 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 ZSWIM6Q9HCJ5 1215 aa23.5■■□□□ 1.35
ACTN4-208ENST00000497637 PIH1D3Q9NQM4 214 aaKnown RBP23.5■■□□□ 1.35
ACTN4-208ENST00000497637 SOX1O00570 391 aaPredicted RBP23.49■■□□□ 1.35
ACTN4-208ENST00000497637 HSP90AA1P07900 732 aaKnown RBP23.49■■□□□ 1.35
ACTN4-208ENST00000497637 CAPN2P17655 700 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 PSMA5P28066 241 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 CFAP100Q494V2 611 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 OSBP2Q969R2 916 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 UPF3BQ9BZI7 483 aaKnown RBP23.49■■□□□ 1.35
ACTN4-208ENST00000497637 ARHGAP39Q9C0H5 1083 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 MAST3O60307 1309 aa23.49■■□□□ 1.35
ACTN4-208ENST00000497637 ADD2P35612 726 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 BCAMP50895 628 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 UBE3CQ15386 1083 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 LRCH3Q96II8 777 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 PRMT6Q96LA8 375 aaPredicted RBP23.48■■□□□ 1.35
ACTN4-208ENST00000497637 JAKMIP1Q96N16 626 aaKnown RBP23.48■■□□□ 1.35
ACTN4-208ENST00000497637 GNL3LQ9NVN8 582 aaKnown RBP23.48■■□□□ 1.35
ACTN4-208ENST00000497637 STXBP5LQ9Y2K9 1186 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 CSADQ9Y600 493 aa23.48■■□□□ 1.35
ACTN4-208ENST00000497637 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
ACTN4-208ENST00000497637 M0R2C6 588 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 ZBTB22O15209 634 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 EVI5O60447 810 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 CETPP11597 493 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 GRK4P32298 578 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 MAP3K9P80192 1104 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 RASGRF1Q13972 1273 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.47■■□□□ 1.35
ACTN4-208ENST00000497637 TMX3Q96JJ7 454 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 CD209Q9NNX6 404 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 SRRDQ9UH36 339 aa23.47■■□□□ 1.35
ACTN4-208ENST00000497637 FARP2O94887 1054 aaPredicted RBP23.46■■□□□ 1.35
ACTN4-208ENST00000497637 FKBP1AP62942 108 aaKnown RBP23.46■■□□□ 1.35
ACTN4-208ENST00000497637 CUL4AQ13619 759 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 KRT32Q14532 448 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 ADCK5Q3MIX3 580 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 FBXO33Q7Z6M2 555 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 RAET1EQ8TD07 263 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 TRIM47Q96LD4 638 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 RPAP1Q9BWH6 1393 aaPredicted RBP23.46■■□□□ 1.35
ACTN4-208ENST00000497637 RNF208Q9H0X6 261 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 CWC22Q9HCG8 908 aaKnown RBP23.46■■□□□ 1.35
ACTN4-208ENST00000497637 CYP46A1Q9Y6A2 500 aa23.46■■□□□ 1.35
ACTN4-208ENST00000497637 CCL5P13501 91 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
ACTN4-208ENST00000497637 UBXN2AP68543 259 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 NFKBIBQ15653 356 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 VPS53Q5VIR6 699 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 CERS5Q8N5B7 392 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 DEFB123Q8N688 67 aa23.45■■□□□ 1.34
ACTN4-208ENST00000497637 HSPD1P10809 573 aaKnown RBP23.44■■□□□ 1.34
ACTN4-208ENST00000497637 VGLL4Q14135 290 aa23.44■■□□□ 1.34
ACTN4-208ENST00000497637 ALDH8A1Q9H2A2 487 aaPredicted RBP23.44■■□□□ 1.34
ACTN4-208ENST00000497637 PDRG1Q9NUG6 133 aa23.44■■□□□ 1.34
ACTN4-208ENST00000497637 PDE6AP16499 860 aa23.43■■□□□ 1.34
ACTN4-208ENST00000497637 RBM5P52756 815 aaKnown RBP eCLIP23.43■■□□□ 1.34
ACTN4-208ENST00000497637 CAVIN4Q5BKX8 364 aa23.43■■□□□ 1.34
ACTN4-208ENST00000497637 SLC9C2Q5TAH2 1124 aa23.43■■□□□ 1.34
ACTN4-208ENST00000497637 RUFY3Q7L099 469 aa23.43■■□□□ 1.34
ACTN4-208ENST00000497637 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
ACTN4-208ENST00000497637 FAM84BQ96KN1 310 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms