RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZNF384Q8TF68 577 aa20.7■□□□□ 0.9
TRAPPC3-207ENST00000497251 SHISA4Q96DD7 197 aa20.7■□□□□ 0.9
TRAPPC3-207ENST00000497251 ZNF512BQ96KM6 892 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC3-207ENST00000497251 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
TRAPPC3-207ENST00000497251 NR2E3Q9Y5X4 410 aa20.7■□□□□ 0.9
TRAPPC3-207ENST00000497251 CAP2P40123 477 aa20.69■□□□□ 0.9
TRAPPC3-207ENST00000497251 PPP4CP60510 307 aa20.69■□□□□ 0.9
TRAPPC3-207ENST00000497251 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
TRAPPC3-207ENST00000497251 TMED8Q6PL24 325 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC3-207ENST00000497251 DOCK1Q14185 1865 aa20.69■□□□□ 0.9
TRAPPC3-207ENST00000497251 USP17L5A8MUK1 530 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 H0YGN5 161 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 SGPL1O95470 568 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 MCAMP43121 646 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 FXR1P51114 621 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 SH3D19Q5HYK7 790 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 ZKSCAN2Q63HK3 967 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 CERS3Q8IU89 383 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 FOXP4Q8IVH2 680 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 TEX11Q8IYF3 940 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 DPF3Q92784 378 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 ZSWIM8A7E2V4 1837 aa20.68■□□□□ 0.9
TRAPPC3-207ENST00000497251 PTPRFP10586 1907 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 ASNSP08243 561 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 SPP2Q13103 211 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 POLA2Q14181 598 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 TBC1D9Q6ZT07 1266 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 WDR18Q9BV38 432 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 GABRQQ9UN88 632 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 MGAMO43451 1857 aa20.67■□□□□ 0.9
TRAPPC3-207ENST00000497251 ATP8B2P98198 1209 aa20.66■□□□□ 0.9
TRAPPC3-207ENST00000497251 NAA16Q6N069 864 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC3-207ENST00000497251 METTL16Q86W50 562 aaKnown RBP20.66■□□□□ 0.9
TRAPPC3-207ENST00000497251 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
TRAPPC3-207ENST00000497251 C19orf81C9J6K1 198 aa20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 ECM2O94769 699 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 TNNI3KQ59H18 835 aa20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 TTC39AQ5SRH9 613 aa20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 ANKRD13CQ8N6S4 541 aa20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 FPGT-TNNI3KV9GXZ4 949 aa20.65■□□□□ 0.9
TRAPPC3-207ENST00000497251 PHIPQ8WWQ0 1821 aa20.64■□□□□ 0.9
TRAPPC3-207ENST00000497251 BCAR3O75815 825 aa20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 FARP2O94887 1054 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 PI16Q6UXB8 463 aa20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 UNC93B1Q9H1C4 597 aa20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 PAK6Q9NQU5 681 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 NOP58Q9Y2X3 529 aaKnown RBP20.64■□□□□ 0.89
TRAPPC3-207ENST00000497251 INHAP05111 366 aa20.63■□□□□ 0.89
TRAPPC3-207ENST00000497251 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC3-207ENST00000497251 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC3-207ENST00000497251 TREML2Q5T2D2 321 aa20.63■□□□□ 0.89
TRAPPC3-207ENST00000497251 DOCK3Q8IZD9 2030 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 HMGCS2P54868 508 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 BACE1P56817 501 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 ANKLE1Q8NAG6 615 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 SH3RF3Q8TEJ3 882 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 CLUAP1Q96AJ1 413 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 TRIM34Q9BYJ4 488 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 CRISPLD2Q9H0B8 497 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 TMOD4Q9NZQ9 345 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 MORF4L1Q9UBU8 362 aa20.62■□□□□ 0.89
TRAPPC3-207ENST00000497251 A0A1W2PPC1 479 aa20.61■□□□□ 0.89
TRAPPC3-207ENST00000497251 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
TRAPPC3-207ENST00000497251 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
TRAPPC3-207ENST00000497251 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
TRAPPC3-207ENST00000497251 AATFQ9NY61 560 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRAPPC3-207ENST00000497251 FAM196BA6NMK8 535 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 HMGCRP04035 888 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 HLA-DOAP06340 250 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 SLURP2P0DP57 97 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 ELNP15502 786 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 IRX3P78415 501 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 MIER1Q8N108 512 aa20.6■□□□□ 0.89
TRAPPC3-207ENST00000497251 CYP2E1P05181 493 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 CCDC84Q86UT8 332 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 TRMT44Q8IYL2 757 aaKnown RBP20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 CRACR2BQ8N4Y2 399 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 TGFBRAP1Q8WUH2 860 aa20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 DEFB118Q96PH6 123 aa20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 DBNDD2Q9BQY9 259 aa20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 GJD2Q9UKL4 321 aa20.59■□□□□ 0.89
TRAPPC3-207ENST00000497251 FLT1P17948 1338 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 RPTORQ8N122 1335 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 RANBP2P49792 3224 aaKnown RBP20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 USP17L10C9JJH3 530 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 EVI5O60447 810 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 XRCC5P13010 732 aaKnown RBP20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 CHRDL2Q6WN34 429 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 SNRKQ9NRH2 765 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 LOC285556D6RIA3 1793 aa20.58■□□□□ 0.89
TRAPPC3-207ENST00000497251 ZBTB7BO15156 539 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms