RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
CCDC142-209ENST00000497232 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.32
CCDC142-209ENST00000497232 KIF3CO14782 793 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 EIF5BO60841 1220 aaKnown RBP13.02□□□□□ -0.33
CCDC142-209ENST00000497232 APPP05067 770 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 TDO2P48775 406 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
CCDC142-209ENST00000497232 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
CCDC142-209ENST00000497232 VEZTQ9HBM0 779 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
CCDC142-209ENST00000497232 TBC1D12O60347 775 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 ANAPC15P60006 121 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 HAND2P61296 217 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 RRP1BQ14684 758 aaKnown RBP13.01□□□□□ -0.33
CCDC142-209ENST00000497232 TATDN1Q6P1N9 297 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 DYNLL2Q96FJ2 89 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
CCDC142-209ENST00000497232 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
CCDC142-209ENST00000497232 ADM5C9JUS6 153 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 E7EWF7 191 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 ZNF213O14771 459 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 ORC4O43929 436 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 SHMT1P34896 483 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 TNFAIP1Q13829 316 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
CCDC142-209ENST00000497232 NBPF12Q5TAG4 269 aaPredicted RBP13□□□□□ -0.33
CCDC142-209ENST00000497232 PRAMEF18Q5VWM3 479 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 TTC6Q86TZ1 520 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 LDHDQ86WU2 507 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 FOXP4Q8IVH2 680 aaPredicted RBP13□□□□□ -0.33
CCDC142-209ENST00000497232 SLC44A5Q8NCS7 719 aa13□□□□□ -0.33
CCDC142-209ENST00000497232 NEDD4P46934 1319 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 MINDY4BA8MYZ0 360 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-209ENST00000497232 RASA1P20936 1047 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 CDK8P49336 464 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 JAG1P78504 1218 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-209ENST00000497232 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-209ENST00000497232 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC142-209ENST00000497232 GLIS2Q9BZE0 524 aaPredicted RBP12.99□□□□□ -0.33
CCDC142-209ENST00000497232 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 SERPINB13Q9UIV8 391 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 ZNF112Q9UJU3 913 aa12.99□□□□□ -0.33
CCDC142-209ENST00000497232 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
CCDC142-209ENST00000497232 PCP11498 1178 aaKnown RBP12.98□□□□□ -0.33
CCDC142-209ENST00000497232 NOVP48745 357 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 TNNI2P48788 182 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 ANTXR2P58335 489 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
CCDC142-209ENST00000497232 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
CCDC142-209ENST00000497232 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 DCPSQ96C86 337 aaKnown RBP12.98□□□□□ -0.33
CCDC142-209ENST00000497232 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 CSRNP1Q96S65 589 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
CCDC142-209ENST00000497232 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 FAM196BA6NMK8 535 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC142-209ENST00000497232 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
CCDC142-209ENST00000497232 MAP1SQ66K74 1059 aaPredicted RBP12.97□□□□□ -0.33
CCDC142-209ENST00000497232 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 CDCA5Q96FF9 252 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
CCDC142-209ENST00000497232 HERC5Q9UII4 1024 aaKnown RBP12.97□□□□□ -0.33
CCDC142-209ENST00000497232 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 TRAF5O00463 557 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 HLA-DOAP06340 250 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 GUCY1A2P33402 732 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 FBXL16Q8N461 479 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.33
CCDC142-209ENST00000497232 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CCDC142-209ENST00000497232 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
CCDC142-209ENST00000497232 PRDM1O75626 825 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 CPA1P15085 419 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
CCDC142-209ENST00000497232 MCCP23508 829 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 NT5C2P49902 561 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 KRT32Q14532 448 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 MAP3K11Q16584 847 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 SIAH1Q8IUQ4 282 aa12.95□□□□□ -0.34
CCDC142-209ENST00000497232 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
CCDC142-209ENST00000497232 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms