RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 USP6P35125 1406 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 GOLGA6BA6NDN3 693 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 MEFVO15553 781 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-215ENST00000497139 OPA1O60313 960 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 POLR3DP05423 398 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-215ENST00000497139 DRP2Q13474 957 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 NBPF20Q3BBV1 942 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 TRAPPC11Q7Z392 1133 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.71□□□□□ -0.05
VEGFA-215ENST00000497139 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
VEGFA-215ENST00000497139 KCNG1Q9UIX4 513 aa14.71□□□□□ -0.05
VEGFA-215ENST00000497139 SEMA3EO15041 775 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 PBX1P40424 430 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 SHC4Q6S5L8 630 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 CCDC50Q8IVM0 306 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 TEX11Q8IYF3 940 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 ZKSCAN4Q969J2 545 aaPredicted RBP14.71□□□□□ -0.06
VEGFA-215ENST00000497139 WWC3Q9ULE0 1092 aa14.71□□□□□ -0.06
VEGFA-215ENST00000497139 ADAMTS13Q76LX8 1427 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 AGPSO00116 658 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 SMTNP53814 917 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 AKAP17AQ02040 695 aaKnown RBP14.7□□□□□ -0.06
VEGFA-215ENST00000497139 PDE4BQ07343 736 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 C11orf91Q3C1V1 193 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 MAGEC3Q8TD91 643 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 EYA1Q99502 592 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 TEX13AQ9BXU3 409 aaPredicted RBP14.7□□□□□ -0.06
VEGFA-215ENST00000497139 HELLSQ9NRZ9 838 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 CHPF2Q9P2E5 772 aa14.7□□□□□ -0.06
VEGFA-215ENST00000497139 IRX1P78414 480 aaPredicted RBP14.7□□□□□ -0.06
VEGFA-215ENST00000497139 MDM2Q00987 491 aaPredicted RBP14.7□□□□□ -0.06
VEGFA-215ENST00000497139 CPLX2Q6PUV4 134 aaKnown RBP14.7□□□□□ -0.06
VEGFA-215ENST00000497139 PSMD14O00487 310 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 GNGT1P63211 74 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 IQCEQ6IPM2 695 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 SELENOOQ9BVL4 669 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 PALLDQ8WX93 1383 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
VEGFA-215ENST00000497139 E7EWF7 191 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 BMP6P22004 513 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 EIF4A1P60842 406 aaKnown RBP14.69□□□□□ -0.06
VEGFA-215ENST00000497139 RBL2Q08999 1139 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 MORC3Q14149 939 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 MAN1B1Q9UKM7 699 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 FAM184BQ9ULE4 1060 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 PRR36Q9H6K5 1346 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 ROBO2Q9HCK4 1378 aa14.69□□□□□ -0.06
VEGFA-215ENST00000497139 PLEKHG3A1L390 1219 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
VEGFA-215ENST00000497139 PLCD1P51178 756 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 TRIM14Q14142 442 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 PTPAQ15257 358 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 PTPN21Q16825 1174 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CCDC70Q6NSX1 233 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CCNI2Q6ZMN8 369 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CDC5LQ99459 802 aaKnown RBP14.68□□□□□ -0.06
VEGFA-215ENST00000497139 KCNH3Q9ULD8 1083 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 PLEKHG1Q9ULL1 1385 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CLSTN1O94985 981 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CDC27P30260 824 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 FILIP1LQ4L180 1135 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 CYP26C1Q6V0L0 522 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 FOXP4Q8IVH2 680 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-215ENST00000497139 FAXDC2Q96IV6 333 aa14.68□□□□□ -0.06
VEGFA-215ENST00000497139 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
VEGFA-215ENST00000497139 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 KSR2Q6VAB6 950 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 N4BP2L2Q92802 583 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 HAUS7Q99871 368 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 VCPKMTQ9H867 229 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 DBF4Q9UBU7 674 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 ODF2LQ9ULJ1 636 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 KIF28PB7ZC32 967 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 GRM8O00222 908 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 NDUFAB1O14561 156 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 SCP2P22307 547 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 MARCKSP29966 332 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 POSTNQ15063 836 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 PAPD7Q5XG87 772 aaKnown RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 ALS2CLQ60I27 953 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 APTXQ7Z2E3 356 aaKnown RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 EHBP1Q8NDI1 1231 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 AENQ8WTP8 325 aaKnown RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 KLC4Q9NSK0 619 aa14.67□□□□□ -0.06
VEGFA-215ENST00000497139 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-215ENST00000497139 PPP2R5AQ15172 486 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 IQCA1Q86XH1 822 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.66□□□□□ -0.06
VEGFA-215ENST00000497139 ZMYM6O95789 1325 aa14.66□□□□□ -0.06
VEGFA-215ENST00000497139 A0A1B0GUA9 196 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms